Salvelinus sp. IW2-2015 (Arctic char): 111981856
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Entry
111981856 CDS
T05762
Symbol
ssc4d
Name
(RefSeq) scavenger receptor cysteine-rich domain-containing group B protein
KO
K25739
scavenger receptor cysteine-rich domain-containing group B protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
111981856 (ssc4d)
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
111981856
NCBI-ProteinID:
XP_023869097
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Position
LG20:18629021..18639822
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AA seq
521 aa
AA seq
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MTAMKTTHSQVRLVNGRNRCEGRVEVWHNGTWGTVCDDDWDMVDANVVCRQLDCGLAMAV
GSISEYGQGSGPVLLDNVDCKGGETDLGQCGSLGWGIHNCYHYEDVSVAYTSVPESRGMG
EPTTPSRRNSGLRDGTIRLVGGLDYCQGRVEVYYRGSWGTVCDDDWGMRDAGVVCQQIYC
GHAVSSTTNAYFGYGTGLILLDNVNCNGHENQLSKCYSLGWGIHNCGHHEDAGVVCSGSG
STTVPPMNTDTMGKGFFQTASTAVTDQTELVTEATTAVTTVAMTTRERTTIRVVNGNSSC
QGRVEVFHNNQWGTVCDDDWDLPNAQVVCRHLGCGPAISAKVLAYFGYGSGPILLDNVDC
RGSEGELAACFHLGWGQHNCGHHEDAGVICTPFQLVGPGNDFGMTERTPTTRPPNEGLAR
LVGGQHRCEGRVEMFSGAEWGTVCDDAWDMPDAQVVCRQLGCGEAAAARGEAFFGPGSGT
ILLDNLKCSGSEASLQQCSHISWEVHNCDHSEDAGVTCSLS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactgccatgaagacaacgcattctcaagtgcgtctggtgaacgggcgtaacaggtgt
gaggggcgtgtggaggtttggcacaacgggacatggggcacagtgtgtgatgacgattgg
gacatggtagatgccaacgtggtgtgtcggcagttggactgtggtctggccatggcggtg
ggcagcatctcagagtatggccagggctcagggcccgtcctgctggacaatgtagactgc
aaaggaggggagacagacctgggacagtgtggaagtctgggctggggcatccacaactgt
taccactatgaggacgtgtctgtcgcatatacatcagtgccggagtcacggggcatgggc
gagcccaccactccgtctaggagaaactcagggttaagagatggtacgatccggttagtt
ggtggactggactactgccagggacgggtggaggtctactaccgtggcagctgggggacg
gtgtgtgatgacgactggggtatgagagacgcaggggtggtgtgccagcagatatactgt
ggccatgccgtttcctccaccaccaacgcctattttggctacgggacaggcctgattcta
ctggacaacgtcaactgtaatggccacgagaaccagctgagtaaatgctacagcctgggc
tgggggatacacaactgtggacatcatgaggacgccggggttgtctgttcaggctcagga
tccactaccgttcctcctatgaacactgacaccatgggcaagggattctttcagactgcc
agcactgcagtaaccgaccaaacagaattagtcaccgaagcaactacggctgtgacaacg
gttgccatgacaacaagagagcggaccaccatccgcgtggtgaatggtaacagcagctgc
cagggccgtgtggaggtgttccacaacaaccagtggggcacggtgtgtgacgatgactgg
gatctgcccaatgcccaggtggtgtgtaggcatctgggctgtggccctgccatctctgcc
aaggtcctggcctacttcggctacggctcgggccccatcctgctggacaatgtggactgt
aggggcagtgaaggggagctggcggcttgtttccacctgggctggggacagcacaactgt
ggacatcatgaagacgctggagtcatctgtacaccctttcagcttgtgggacctggaaat
gacttcgggatgacagagagaacgcccaccactagaccaccaaatgaaggcctggcgagg
cttgtgggcgggcagcaccgctgcgagggccgggtggagatgttctcaggggcggaatgg
ggtacggtgtgcgacgatgcttgggacatgcctgatgcccaggtggtgtgtcgccagctg
ggctgtggggaggctgctgcggcccgtggggaggccttctttgggcccggcagcggcacc
atcctcctggacaatctgaagtgcagcggctctgaggcctcgctccagcagtgctcccac
atatcctgggaagtgcacaactgtgaccactctgaagacgccggcgtcacctgctcactg
tcgtga
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