Salvelinus sp. IW2-2015 (Arctic char): 111982080
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Entry
111982080 CDS
T05762
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111982080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111982080
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111982080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_C
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
111982080
NCBI-ProteinID:
XP_023869396
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All DBs
Position
LG20:complement(34091683..34104569)
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AA seq
332 aa
AA seq
DB search
MSFFSFGQSAQIDIVLNDAETRKKAEHKTEDGKVDQYFLFYDGDTVSGKVNITLKNPAKR
LEHQGIRIEFIGKIELYYDRGNNYEFVSLVKDLAQPGELTQSRTFDFEFTNVEKPYEAYT
GQNVKLRYFLRVTVSRRLNDISKEMDIVVHTLSMYPELNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIRHMEINIIKRETTGTGTNVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEITPTMXDINKKYSVRYYLNLVLLDEEERRYFKQQEITLWRRGDVVR
KSMSHQAAXASQRFESSSSDEKALAHAQAKEQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttagttttggtcaaagtgcacaaatcgatatagttttgaatgacgctgag
acaagaaagaaagccgaacataagaccgaagatgggaaagtggaccaatattttctgttt
tatgatggcgatacagtatctggaaaagtcaacataacactgaagaatccagcgaaaaga
ctcgagcatcaaggcatcagaatcgagtttattggtaaaattgagctgtactacgacagg
ggaaacaactatgagtttgtgtctctggttaaagacttggcccaaccgggagagctaacg
cagtcccggaccttcgactttgagttcacaaatgtggagaaaccatacgaggcctacacg
ggccagaatgtcaaattacgctactttctgcgggtaactgtaagccggagactgaacgac
atcagtaaagaaatggacattgttgtgcacacgctcagtatgtacccagaactcaactcg
tctatcaagatggaagtgggaatcgaagactgcctgcacatcgagtttgagtacaacaag
tctaagtaccacctaaaagatgtcatcgtggggaagatttacttcctgttggtacggatc
aagatcagacacatggagattaatatcatcaagcgagagacgactggcacgggcacaaac
gtgtaccatgagaacgacaccatagccaagtacgagattatggatggagcaccagtgaga
ggggagtcratccctattcgactttttctggctggctatgagatcactcctacgatgayg
gacatcaacaagaagtactctgtgcggtactacctcaatctggtactcytagacgaggag
gagaggcgttacttcaaacagcaggagatcactctgtggaggaggggggacgtagtgagg
aagagcatgtcccaccaagcggccatrgcctcacagcgcttcgagtcctcgtccagtgac
gagaaagccctagctcatgcccaggctaaggaacagtag
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