Salvelinus sp. IW2-2015 (Arctic char): 111982125
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Entry
111982125 CDS
T05762
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111982125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111982125
Membrane trafficking [BR:
salp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
111982125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Spectrin_Anc-1_2
EcoEI_R_C
Dcst2
ATG17_like
Relaxase_C
Lzipper-MIP1
PUB2_N
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
111982125
NCBI-ProteinID:
XP_023869466
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All DBs
Position
LG20:complement(38335525..38375092)
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AA seq
300 aa
AA seq
DB search
MKDRTHELRVGKETEEEDDVAVNMEKDRFMDEFFVQVEEIRGFIEELSEKVEEVKRQHSA
ILAAPNPDEKTKAELEQLMTDIKKFANKVRSKLKSIEQSIEHEEALSRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDSNITQQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRWFNEKIVTHSIPYIVDVSSTPLCLNRHSAGWDGTLLT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgtacacacgagctaagggtggggaaggagactgaggaagaagatgatgtg
gcagtcaacatggaaaaagatcgatttatggatgagttctttgtacaggtggaggagatc
cgaggcttcatcgaggagctctcagagaaggtggaggaggtgaagagacaacacagcgcc
atcttggccgcccccaatcctgacgaaaaaacgaaggcagagctggagcagctgatgaca
gacataaagaagtttgcgaacaaagtgcgctccaagttaaaaagcattgaacagtccata
gagcatgaggaggctttaagcaggtcgtctgcagatctgaggatacgtaagacacagcat
tccacgttgtctcggaagtttgtggaggtgatgtcagagtataatgctacgcagtcggac
taccgggaacgctgcaagggccgcatccaaagacaactggagattactggtaggaacaca
actaatgaggaactggagagcatgctggagagtgacaaccctgccatcttcacatcaggg
atcatcatggactccaacatcacccagcaggccatgaatgagattgagacgagacacact
gagatcatcaagctggagaacagcatcagagaacttcacgacatgttcatggacatggcc
atgctggtggagagccagggggagatgatagatcgtatagagtacaacgtggagcactca
gtggactatgtagagagggccgtgtctgacaccaagaaggcagtaaagtaccagagtaaa
gccaggaggtggttcaatgagaagattgtcacacacagcataccttacattgtagatgtc
tcgtccacccccttgtgtctgaacagacacagtgcaggatgggatgggaccctgctcaca
tag
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