Salvelinus sp. IW2-2015 (Arctic char): 111982139
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Entry
111982139 CDS
T05762
Name
(RefSeq) tubby protein homolog isoform X1
KO
K19600
tubby and related proteins
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111982139
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111982139
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111982139
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Other domain-containing proteins
Tubby family proteins
111982139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
111982139
NCBI-ProteinID:
XP_023869496
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Position
LG3:1877168..1915404
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AA seq
569 aa
AA seq
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MRGAILATSLGTVTTKEVSRNGRSDRMNNINKSRPSSSASFSSTSTASALDDDSTSLRQQ
KLEKQRALLEQKQRRKRQEPLMVQPNPEARPRRSRPRRSEEQAPLVESRLXITSDVIMDG
IDGPAAFMGSEAPDLGAKIQILSVSKSQPLSLSQPLHQSPLAEEPDRDGDTETLLEPKTD
IHELLQKREAWDISLCPSPSLTDPANDRVVQLVGAVEKGPEEGPEEGPEEGLEEGPERPL
SAREKLLQSGLSGSMNYEEASEDEEHGDEDRTRSLSPNPESTRPASASSTKSNTEYVTPG
SPTAESALIEVDNLEEFVVRPAPRGITVKCRISRDKKGMDRGLYPTYFMHMEREDGRKLF
LLAGRKRKKSKTSNYLISVDATDLSREGESFMGKLRSNLMGTKFTVYDQGTNPCKNPGAL
LEESNTRQELAAICYETNVLGFKGPRKMTVIIPGMNMNFERVPVRPNSEQDSLLSKWQNH
SVENLIELHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIVHDNDPDYIVMQFGRVAEDV
FTLDYNYPMCALQAFAIGLSSFDSKLACE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaggggggcaatcttggcaacgtcactaggcacggtcaccaccaaagaagtctcccga
aacggaagaagtgacaggatgaacaacatcaacaaaagcagaccctccagctccgccagc
ttctcctctacctcaacagcaagtgcccttgatgatgacagcaccagcctcaggcagcag
aagctggaaaagcagagggcgctgttggagcagaagcagcggcggaagcggcaggagcct
ctgatggtgcagcccaacccagaggcccggcccaggcgctccaggcctcggcgcagtgag
gagcaggccccgctggtggagtcacgcctcagkatcaccagcgatgtcatcatggacggt
atcgacggccctgctgccttcatgggctctgaggccccagacctgggcgccaagatccag
attctgtcggtgagcaagtcccagcccctgtccctgtcccagccgctgcaccagtctccc
ctcgccgaggagcctgaccgggacggggacacggagactctgctggagcccaagacggac
atccacgagctgctgcagaaacgagaggcgtgggacatctctctctgcccctccccctct
ctgactgaccccgccaacgacagggtggtccagttggttggtgcagtggagaagggccca
gaggagggcccagaggaggggccggaggaggggctggaggaggggccagagcgcccactg
tctgccagggagaaactactccagtcaggtctgtcaggcagtatgaactacgaagaggcc
agtgaggatgaggaacacggtgacgaagaccggacacgctcgctgtcccccaacccagag
tcaacccggcctgcgtctgcctccagcacaaagtccaacacagaatacgtgacaccgggg
tcgcccacggcggagagcgccctgatcgaagtggacaacctggaggagtttgtggtgcgt
cccgccccccgtggcatcaccgtcaagtgccgcatatcccgggacaagaagggaatggac
cgcggcctgtaccccacctactttatgcacatggagagagaggacggcaggaagctgttt
cttcttgctgggaggaagaggaaaaagagcaagacgtccaactacctgatctcagtggac
gccacggacctgtcacgtgagggagagagcttcatggggaaactgaggtctaacctgatg
gggaccaagttcacggtgtatgaccaaggcaccaacccctgtaagaaccctggagctctg
ctggaggagagcaacacacgacaggaactcgcagccatctgctatgagaccaacgttctg
gggttcaaaggtccccgcaagatgaccgtcatcatcccaggcatgaacatgaactttgag
agggtccccgtccgtccaaacagtgagcaggacagccttctaagtaagtggcagaaccac
tcagtggagaacctgattgagctgcacaacaaggcccccgtgtggaacgacgacacccag
tcctacgtgctcaatttccacggccgcgtcacacaggcctctgtcaagaactttcagatc
gtccacgacaacgatccggactacatcgtaatgcagtttggragagtggccgaggacgta
ttcaccttagactacaactaccccatgtgtgccctgcaagccttcgccattggrctgtcc
agttttgacagcaaactggcctgcgagtga
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