Salvelinus sp. IW2-2015 (Arctic char): 111982372
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Entry
111982372 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111982372
04147 Exosome [BR:
salp04147
]
111982372
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
111982372
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111982372
Exosomal proteins of other body fluids (saliva and urine)
111982372
Exosomal proteins of colorectal cancer cells
111982372
Exosomal proteins of melanoma cells
111982372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
CENP-F_leu_zip
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
111982372
NCBI-ProteinID:
XP_024003609
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Position
LG21:2025105..2026886
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AA seq
482 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGSAMRSGSVYG
GAGGSGVRISSSSFGSGGGGGGGGYSFGMGGGGGGGGGFGMGGGGGGGGADMNVSANEKA
TMQNLNDRLSTYLEKVRKLEAANAELELKIRQFMESKTSPSSRDYSAYYATIADLQDKIQ
DATRVNGSIYLNIDNAKLAADDFRTKYENELAMRQSVEADIAGLKRMLDEMTMARSDLEM
QIEGXKEELIYLRKNHEEELLAMRAQMTGQINVEVDAAPQEDLSRVMAEIREXYESVSAK
NQRDLEXWFQTRSETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQLSMKGSLEN
TLAETEGRYSMQLGRLQNQVTVSGGALVSSRSDMERQGQEYKMLLDIKTRLEMEIAEYRR
LLDGEASGLGLSSSKSVHSSSSSHISSSSSGPGXPTKGKVVIITEEIVDGKXVSSSGTKH
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggtggtggaggtggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcacgcttctcc
tcgatgggtggtggtggtggtggtggaggaagtgccatgaggtccggcagtgtgtatgga
ggtgcaggaggctctggggtgcgcatctctagctcctcgtttggttccggcggcggaggt
ggtggtggcggttatagtttcggaatgggagggggtggtggcggaggaggcggtttcggc
atgggaggtggtggtggcggcggtggagctgacatgaatgtgtcggccaacgagaaggcc
acaatgcagaacctgaacgaccgcctgtccacctacttggagaaggtgcgcaagctagag
gcggccaacgccgagctggagctgaagatccgtcagttcatggagagcaagacgtctccc
agctctcgtgactactctgcctactacgccaccatcgccgacctgcaggacaagatccag
gatgccactcgtgtaaacggaagcatctatctgaacatcgacaacgcaaagctcgctgca
gatgacttcagaaccaagtatgagaacgagctggccatgcgtcagtcggtggaggcggac
atcgccggactgaagaggatgctggacgagatgaccatggccagatctgacctggagatg
cagatcgagggcntgaaggaggagctcatctatctcaggaagaaccatgaggaggagctg
ctggccatgagggcacagatgactggacagatcaacgtggaggtggacgcagcaccacag
gaggacctgtccagagtcatggctgagatccgtgagncatacgagtccgttagtgccaag
aaccagcgcgacctggagngctggttccagaccaggtcggagacgttgaacaaggaggtg
gcatccagcacagaggttctccagacctcaaagtcagagatctcagagatccgtcgcaca
cttcagggcttggaaatcgaactgcagtcacagctcagcatgaaaggctccctggagaac
acgctggcggagacggagggccgttactccatgcagctgggacgcctccagaaccaagtg
accgtgtctggaggagcactagtgtcctctcgcagcgacatggaacgccagggccaggag
tacaagatgctgctggacatcaagacacgcctggagatggagatcgctgagtacaggagg
ctgctggatggagaggctagcggcctcggcctcagctcctcgaaatctgtccacagctcc
tccagctcccacatcagctcctccagctctggccccggcnctcccaccaaaggcaaggtg
gtgatcatcacagaggaaattgtggacggcaagnttgtctcctcaagtggaaccaagcac
accacataa
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