Salvelinus sp. IW2-2015 (Arctic char): 111982448
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Entry
111982448 CDS
T05762
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111982448
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
111982448
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
111982448
NCBI-ProteinID:
XP_023869783
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Position
LG21:955650..1067274
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AA seq
603 aa
AA seq
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MLRILDTVVTVVTISFVVEGVLGGYGMSMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPTYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSAQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSEXARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTXGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTTASSTEQPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggattttggataccgtggtcactgtcgtgaccatttcctttgtggtagagggg
gtgctcggtggctacgggatgagcatgttcgccgcgcaaacatctcccccggacccttgc
tacgacgagaacggtaacccgaggagatgcattcccgattttgtgaactctgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgcttggtaaca
gagaagggcgatgagagaaataggaactgccatacttgcgatgcctcggaccccaaaaag
tatcacccaccgacatatctaacggatctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaatacccccaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactacggmaaatcttgggtacctttccaatactattcggcccagtgc
aggaaaatgtacaccaaaccgagcaaggccaccattaccaaacagaacgaacaagaggcg
atatgcacggactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
actctggacggcagaccgtcggcgcacgacttcgacaactcgccggtgctccaggactgg
gtcaccgccacrgatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagcwmgcccgggactcttatttctatgcggtgtccgatctgcaagtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgartgcaaacataatacckcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagctagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcacgccaggcgatgccgtttcaacatggagctgtacaagctgtctggg
aggaagagcggaggagtctgtctcaactgccgccacaacacggccggacgccactgtcac
tactgcaaggagggttactacagagacctgtccaaaaccatctctcacaggaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacgggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgctcctccgacaacc
acagccagcagtacagagcagccagcagactgtgactcctattgcaaggcgtcgaaaggc
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgcggagaccagttcctgtgggtcagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggatccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgcgagaagaaaggcaagtgc
aagaaggcatag
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