Salvelinus sp. IW2-2015 (Arctic char): 111982593
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Entry
111982593 CDS
T05762
Name
(RefSeq) hematopoietic lineage cell-specific protein isoform X1
KO
K06106
cortactin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
salp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111982593
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111982593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111982593
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111982593
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
111982593
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
111982593
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
111982593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
DUF4629
Motif
Other DBs
NCBI-GeneID:
111982593
NCBI-ProteinID:
XP_023869951
LinkDB
All DBs
Position
LG3:3529398..3535697
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AA seq
521 aa
AA seq
DB search
MWKSVVGHNVSLKVAEVDDWETDPDFENDVSEQEQRWGAKTIEGSGRKEHISVSELRQKV
SQEHEVGKQKERAEAPKASYGYGGKFGVEKDRMDKGAVGHGYVAQVEQHSSQTDAKRGFG
GKFGVQKDRVDKSAMGFDYKGEVDQHTSQKDYSKGFGGKFGVEKEKVDKAALGYDYKGET
EKHQSQKDYSKGFGGKFGVEKEKVDKAALGYDYKGETEKHESQKDYAKGFGGRYGVQTDR
MDKSAVAFTDMESPTSAYEKTLPLEASSAGAGNLKARFENLARSSDEENRKRAEEERARR
QAREKREQEEARRRQQEQNSREEEAEQHQPPPVEEQRPPPVPETNRKPQPPQLPIARAVP
QIPRDEPELVEEEEEEPDYDQPPCLPPRSSDLLEAEPPQEQTPSEPEQEDEGEYEDISSM
EAEPPQEQTPSEPEQEDEGEYEDISPIPFPEPDPAVDNDYEDLTCGQTAVAIYDYQGEAD
DEISFNPDDVITNIEMVDEGWWKGHCHGRIGLFPATFVKMM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagtcagtggtgggacacaacgtgagcttaaaggttgcagaggtggacgactgg
gaaaccgaccctgactttgagaatgatgtgtcagaacaggaacagagatggggggccaag
accattgaggggtctggtcgaaaagaacacatcagtgtatcagagctgagacagaaggtg
tcccaggagcatgaggtggggaagcagaaggagcgagcggaggctcccaaggcctcttac
ggttacggagggaagtttggagtggagaaagaccgcatggacaagggggcagtggggcat
ggctacgtggcgcaggtggagcagcactcatcccagaccgatgcaaagagaggattcggg
gggaaatttggagtgcagaaagaccgtgtggataagtctgccatgggttttgattacaag
ggagaggtggatcagcatacatctcagaaagactattcaaagggttttggagggaagttt
ggggtggagaaggagaaagtggacaaggctgctttaggttacgactataagggagagacm
gagaagcaccagtctcagaaagactattcaaagggttttggagggaagtttggggtggag
aaggagaaagtggacaaggctgctttaggttacgactacaagggagagacagagaagcat
gagtcacagaaagactatgccaagggctttgggggacgctatggagtccagacagaccgc
atggataaaagtgcagtggccttcacagacatggaatcccctacctctgcctatgagaag
acactaccattggaggcttcaagtgcaggggcaggcaacctgaaggctcgctttgagaac
ttggctcggtcatcagacgaggagaacagaaagcgagcagaggaggagagagccaggaga
caggctagagagaagagagagcaggaggaggcacgacgcagacaacaggaacagaacagc
agggaggaggaagcagagcagcatcagcctccacctgttgaagagcagagacctccacct
gttccagagaccaacaggaagccccaaccaccacagctgcccattgccagggcagtgcct
cagataccaagagatgaacctgagctagtggaggaagaggaggaggagccagactatgac
cagcccccgtgcctgcccccacggtcaagtgacctgctggaggcggagccacctcaggag
cagaccccatcagaaccagagcaggaggatgagggagagtatgaggatatctcatcaatg
gaggcggagccacctcaggagcagaccccatcagaaccagagcaggaggatgagggagag
tatgaggatatctcaccaatacctttcccagaacctgatccagctgtggataatgactat
gaggacctgacatgcggtcagacagcagtggccatttatgactaccaaggagaggcagat
gatgagatctccttcaacccggatgatgtcatcaccaacatagagatggtggacgaaggc
tggtggaagggacactgtcacggacgcattggacttttccctgctacattcgtgaaaatg
atgtag
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