Salvelinus sp. IW2-2015 (Arctic char): 111982763
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Entry
111982763 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03015
mRNA surveillance pathway
salp04110
Cell cycle
salp04114
Oocyte meiosis
salp04261
Adrenergic signaling in cardiomyocytes
salp04350
TGF-beta signaling pathway
salp04382
Cornified envelope formation
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111982763
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111982763
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111982763
04114 Oocyte meiosis
111982763
09144 Cellular community - eukaryotes
04530 Tight junction
111982763
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111982763
09158 Development and regeneration
04382 Cornified envelope formation
111982763
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111982763
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111982763
03036 Chromosome and associated proteins [BR:
salp03036
]
111982763
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111982763
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111982763
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111982763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
PDS5
Cnd1
Adaptin_N
SCD
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
111982763
NCBI-ProteinID:
XP_023870120
LinkDB
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Position
LG22:3745380..3764269
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AA seq
595 aa
AA seq
DB search
MQHKSKMAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPF
LTDTIYDEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRK
ISQEHSPVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLC
SDDTPMVRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATL
LPQEDLETLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDC
EAEVRAAAANKVKEFCENLPEDSRETIIMTHILPCVKELVSDXNQHVKSALASVIMGLST
ILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAED
AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNTLCMAWLIDHVYAIREAATCNLMKLVEKFG
AEWAQNTIVPKVLGMANDPNYLHRMTTLFCINALSEVCGQDITTKQMLPVVLKMSNDQVA
NVRFNVAKSLQKIGPVLDSNALQTEVKPVLEKLDTDTDMDVKYFAQEAISVLALA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaacataaatccaaaatggcaggagctgatggagacgattctctctaccccatcgcg
gtgctcattgacgagcttcgtaatgaggatgtgcagctgcgactgaacagtatcaaaaag
ctgtctaccatcgcattggcccttggagtggagaggacccgcactgaactcctccccttc
ctcacagacaccatctatgatgaggatgaggtgcttcttgccttggctgagcagctgggc
aacttcaccatgctggtgggaggccctgaatatgttcactgtctgctgccgccgctggag
agcctggctaccgtggaggaaacggtggtgcgagacaaggcggtggagtctctgcgtaag
atctcccaggagcactctcctgtggacctggaggtgcactttgagcccctggtgaagagg
ctggccagtggtgactggttcacctcccgcacctctgcctgtggcctgttcagcgtctgc
tacccccgcgtgtccagcaccgtcaaggctgaaattcgccagcatttccgcactctgtgc
tcagatgacactcccatggtgcgccgtgccgcagcmtccaagcttggggaatttgccaag
gttctggagctggactatgtcaagagtgacatcatctccctcttcaccgcactggcctct
gatgagcaggactcagtgcgcctgctggctgtggaagcctgtgtgagcatcgccacgctg
ctgccccaggaggacctggagacgctggtgatgcccaccctgcgccaggccgctgaggac
aagtcctggagggtccgctacatggtggctgacaagttttctgagctccagaaagcggtg
ggcccagagatcaccaagaacgacctggtcccagccttccagaatctgctgaaggactgc
gaggctgaggtccgagccgccgctgccaacaaggtcaaggagttctgcgagaaccttcca
gaagacagcagagagaccattatcatgactcacattctgccctgtgtcaaggaactggtg
tctgacnacaaccagcatgtgaagtctgccctggcctctgtcatcatgggcctgtccacc
atcctgggcaaagacaacacagtggagcacctgctgcctctgttcctggcccagctcaag
gacgagtgccccgaggtgcgcctcaacatcatctccaacctggactgtgtcaacgaggtg
atcggcatccgccagctctcccagtcgctgctgcctgctatcgtggagctggccgaggac
gccaagtggagggtccgcctggccatcatcgagtacatgcccctgttggccggacagctg
ggagtggagttcttcgacgagaagctgaacaccctctgcatggcatggctcattgaccac
gtttacgctatccgcgaggcagccacctgtaaccttatgaagctggtggagaagtttgga
gccgagtgggcccagaacaccatcgtgcccaaggtgctgggcatggccaacgaccccaac
tacctgcacaggatgaccacgctcttctgcatcaacgctctgtctgaggtctgtggccag
gacatcaccactaagcagatgctgcctgtggtcctcaagatgtccaacgaccaggtsgcc
aacgtgcgcttcaatgtggccaagtccctccagaagatcggccccgtccttgacagcaat
gctctgcagacagaggtgaaaccagtcctggagaaactagacacagacacagatatggat
gttaagtactttgcccaggaagctataagcgttctggccttggcataa
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