Salvelinus sp. IW2-2015 (Arctic char): 111982781
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Entry
111982781 CDS
T05762
Name
(RefSeq) claudin-like protein ZF-A89
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecule (CAM) interaction
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111982781
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111982781
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111982781
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111982781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111982781
04147 Exosome [BR:
salp04147
]
111982781
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111982781
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111982781
Exosomal proteins of colorectal cancer cells
111982781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
DUF4153
MFS_MOT1
TMEM174
SUR7
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
111982781
NCBI-ProteinID:
XP_023870142
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All DBs
Position
LG22:22733720..22735139
Genome browser
AA seq
255 aa
AA seq
DB search
MGRIGKEVLGQVLSFIGFVGVAVTTGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKINDSMMRLATDLQAARALVIISIIFNFVGLIVTFIGGQCTSTLKSESSKGKVTIL
GGILLLIGALLVLIPVCWSAAFTISDFNNPLTIETQRREIGASIYIGWGXAALLLIGGII
LCTSCPPQKMYGYPGYPQGAPMYPYPGQPMVQAGPYGRVYTPASRPYSGTGSYAPSKPYA
APIEYAVPGRPGRYL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggatcggaaaggaggtgttgggccaggtgctcagcttcatcggctttgtgggg
gtggcagtgaccacgggtatccccatgtggagggtaaccacttacatcggtgccaacatt
gtaacaggacagattgtgtgggacggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaagataaacgactcaatgatgaggctagcaacagaccttcaggcagcg
agggccctggtcatcatctccatcatcttcaactttgtcggcctgattgtcaccttcatc
gggggccagtgcaccagcaccctgaagtctgaatcctccaagggtaaagtgacgatcctt
ggaggcatcctgctgctcattggtgctcttctggtcctcatccccgtctgctggtcggca
gcgttcaccatctcagactttaataaccctctgaccatcgagacccagaggagggagata
ggagcctccatctacatcggctggggckccgcagcgctgctcctcatcggggggatcatc
ctctgcacctcctgcccgccccagaagatgtatgggtacccaggctatcctcaaggagcg
cccatgtacccctatccaggccaaccaatggtccaggcagggccctatgggagagtttac
accccagccagcagaccctactcagggacaggttcgtatgcaccaagcaagccatatgca
gcaccaatagaatacgctgtacctggacggcctggacggtatctgtaa
DBGET
integrated database retrieval system