Salvelinus sp. IW2-2015 (Arctic char): 111982849
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Entry
111982849 CDS
T05762
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111982849
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111982849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
111982849
NCBI-ProteinID:
XP_023870253
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Position
LG22:25345762..25350851
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AA seq
541 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHR
FVQYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSS
SKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIA
AIEKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQG
VEMMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNW
NVKNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMN
DKELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKEKGSESEADNSDSDSDREDEDR
KRSGAENDDDEEGAKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDNDDNEPKNGAAR
SSGEEGSGSEEEEKESHRERSRSGSVSPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDS
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatacaaacacaagcccagcgagactcagacggtcacaggtctaggagt
tcatcacacagaactgttccagagaggtccggcgtggtctgtcgggtaaagtactgcaat
agcctgcctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacagg
tttgtgcagtacaaggctacatcgttagagaagcaacacaaacatgagctgctgactgag
cctgaccttggcgtcaccatcgacctcattaacccagacacctaccgtgtcgaccccagc
attcttctggatccagctgatgagaagttattggaggaagacatcacagctccatccagc
tcgaaaagatctcagcagcacgccaaggtggtcccgtggatgaggaagactgagtacatc
tctacagagttcaatagatatggtgtctccaatgagaaggtggaagtcaagatcggtgtg
tctgtcaaacagcagttcacagaggaggagatatacaaggatcgggacagccagattgct
gctattgaaaagacctttgaggatgcccagaaaccgattgctcagcactacagtaaaccc
agagtcactcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccg
tgtgctcaggtaatcttcgactctgatcctgcgcctaaagacatgtcagcaccccagggt
gtggagatgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagttt
gtggcctacttcctgcccaatgaggaaacgattcgcaagcgcaagagagacgtggatgag
gagctggactacatgcctgatgatctgtatgactataagatagccagggagtacaattgg
aacgtgaagaacaaagccagcaagggctatgaggagaactacttctttatcttcagagac
ggagatggagtctactacaatgaactggagaccagagtgaggctgagtaagaggagagct
aaggctggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaac
gacaaggagctggaagcacaggacgcgcgtaaggctcagctggagaaccatgaaccagag
gatgaagaagaggacatggacttgggtaaactgcaggactctggtgatgagaaggagaaa
ggcagcgagagtgaggcagacaactctgacagtgactctgacagggaggatgaggatcga
aagcggagtggagctgagaatgatgatgacgaggagggagcgaaacggaggaggaaggcc
agtggtagcggcagtgagagtggcgaggaggaggtcaagctggcagatgaggtggagatc
ttcggtagcgatgacgacagtgataacgatgataacgagcccaagaatggagcagcccgg
agcagtggggaggagggcagtgggagcgaggaggaggagaaggagagccatagggaaagg
agtaggagtggcagcgtgtctccggcccacagtagcggtagtgaccactcagagggtggc
cgtgcccagagcgggagtggcagtgagcaggcctcagattccagcgatggcagtgacagt
gaataa
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