Salvelinus sp. IW2-2015 (Arctic char): 111982861
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Entry
111982861 CDS
T05762
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111982861
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111982861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_10
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
111982861
NCBI-ProteinID:
XP_023870284
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All DBs
Position
LG22:complement(18539938..18544268)
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AA seq
431 aa
AA seq
DB search
MDNLEEDLTCSVCYSLFADPRVLPCSHTFCKSCLDNVLQVSAVYTIWRPLRLPLKCPNCR
SVVELPPTGVDALPINVSLRAIIEKFQKDSQPQPPSCPEHHRQPLNIYCVQDRQLICGFC
LTVGQHQGHPIDDLQAAFIRERQAPTHLLGRLSDNRWAKVRELGEQLEQEKASCEGLVRQ
DRQAVEQYFQGLELVLARKKEAFMGALDTASMEVSLAYDPLIQRLKELQEEQLDLLSLGS
AVEDEDSPLVFLEKVYLFRERVEALVNATLPEVTSLAITPRAAEYLEQHWVGVTIGGLEE
GPVPRVCCCAKPTILKTVLRTEAGSQPGGWVHDLWQQLHPTPPVVLLGLLLLLAAVWVNP
VGGASLGFSLLSQLSQVVHGLSSELTTSLWETTGFLYAQTGEVVWRYSSALSTLGENTYQ
KLASLYKTLSS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggataacctagaggaggacctgacatgttctgtgtgctattccctcttcgctgaccct
cgggtcctgccctgctcccacaccttctgtaagtcctgcctggacaacgtactccaagtc
tctgccgtctatacaatctggcggccgctgcggctcccactcaagtgccccaactgccgc
agtgtggtagagctcccgccaacaggtgttgatgcattgcccataaatgtctccctccgt
gccatcattgagaagttccagaaggacagccaaccacagcccccctcctgccctgagcac
caccgacaacccctcaacatctactgtgtccaggaccgccagctcatctgtggtttctgc
ctaacagtgggccagcaccagggacaccccatcgatgacctgcaggcagccttcatcagg
gaaaggcaggcacccactcacctactggggaggctctcagacaaccgctgggcaaaggtg
cgtgagctgggggagcagctggagcaggagaaggccagctgtgagggcctagtgaggcag
gatcggcaggccgtggaacagtacttccaggggctggagctggtgcttgccaggaagaaa
gaggcattcatgggggccctggacaccgcaagcatggaggtgtcgctggcctacgatcca
ctcatccagaggctgaaggagctgcaggaggagcagctagacttgttgtctctgggctca
gctgtggaggatgaagactcccccctggtcttcctggagaaggtgtatctgttccgggag
agggtggaggcactggtaaatgccaccctgcccgaagtcacatccctcgctatcaccccc
cgtgctgctgagtacctggagcagcactgggtgggggtgaccatcggagggctggaggaa
gggccggtgcctcgggtctgctgctgtgccaagcccaccattctgaagacggttcttagg
acagaggcagggagtcaacctggaggctgggtccatgatctgtggcagcagctccatccc
actccccctgtggtgctcctggggctgctgctgctcctggcggcagtgtgggtgaatcct
gttggcggagcatctctgggattctccttgctgtcccagctcagtcaggtggtgcacggc
ctgagtagcgaactgaccacctcactatgggagacaacaggcttcctgtatgcacagaca
ggggaggtggtgtggaggtacagctctgccctctccacactgggggagaacacctaccag
aagctggcatccctctacaagaccctcagctcctga
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