Salvelinus sp. IW2-2015 (Arctic char): 112067846
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Entry
112067846 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-B-like
KO
K04437
filamin-A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04510
Focal adhesion
salp04518
Integrin signaling
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112067846
09133 Signaling molecules and interaction
04518 Integrin signaling
112067846
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112067846
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112067846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
112067846
04147 Exosome [BR:
salp04147
]
112067846
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112067846
Intermediate filaments
Intermediate filament-binding proteins
112067846
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112067846
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
112067846
NCBI-ProteinID:
XP_023990331
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All DBs
Position
LG24:complement(8482232..8492465)
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AA seq
515 aa
AA seq
DB search
MREVRVEESTAGRGKPLLQGPCFGEFLGSQSLTGFSGIPATTRTAQEGVPIQVPRGPKED
TATGDQSGENGAHTARQDRGQHVRGAPSKFTVGPLGEVRGTQGSRRRGTGLEIEEWQEWQ
SEFSYLEAEQAWLQEGSVHRCRGPSKAESALKQEMVAAGGLCGAEPGDYEVSIKFNDEHX
PDSPFVVPIRHYLSLITRRLTVTRLKEMGLKVGQEASFAVQLNGARGLIDAKVHTPXGAV
EECYVTELDSDQHAIRFIPRENGVHSIEVRFNGSHIPGSPFKIRVGEIGQVGDPGMVSAF
GPGLEGGTTGVASDFVVNTCNAGSGALSVTIDGPSKVKMDCQDSSEGYKVTYTPMAPGSY
LITIKYGGPSHIVGSPFKAKVTGKSVSLGHSLHETCPXLVETVNQDVVISSSMGVAYGPK
FSSDASKVVSRGAGLSTAFVEQKNTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHLGNR
MYNVTYTVKEQGNYILIVKWGDENVPGSPFHVTVP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagtgcgtgtggaggagagtaccgcaggtcgggggaagcctctccttcaggga
ccgtgttttggagagttcctggggagtcagagtctcacaggcttcagtgggataccagcc
actaccagaacagctcaagagggtgtgccaatccaggtacccaggggacccaaggaagat
acggccacaggtgaccagtcgggggagaatggggcccacacggcacgtcaagaccggggc
cagcacgtccggggagccccttccaagttcaccgtggggcccctgggagaggtgaggggc
acacaagggtcccggcgccgggggacggggctggaaatagaggagtggcaggaatggcag
tctgagtttagttatctggaggcagagcaggcttggttgcaggaaggttctgtccatcgc
tgtagagggcccagtaaggcagagtcagctttgaaacaggagatggttgctgcgggtggc
ctatgtggtgcagaaccaggtgactatgaggtgtccattaagtttaatgatgagcacnat
ccagacagtcccttcgtagttcccatccgccactacctgtccttgataacccgccgcctt
acagtcacgcgattgaaggagatggggttgaaggtgggccaggaggcgtcgttcgcagtg
cagttgaacggggcgagggggttgatagatgctaaggttcacaccccymccggagctgta
gaggagtgttacgttactgagctggacagcgaccagcacgccatccggtttatcccgagg
gagaacggagtccactccatcgaagtgcgtttcaacgggagccacattcccggtagtccc
ttcaagatccgcgtgggagagatcggacaggtcggagacccgggaatggtgtctgccttc
ggacctgggctggaaggaggaactacaggcgtggcatcagactttgtagtgaacacatgt
aatgcggggtcgggtgctctgtcagtgaccatcgatgggccgtccaaggtcaagatggac
tgtcaggatagttccgagggttacaaggtcacttacacacccatggcccccggcagctat
ctcatcaccatcaaatacgggggaccatcccacatcgtaggcagccccttcaaggctaaa
gtcacaggtaagtccgtctctctgggtcacagtctacatgaaacctgtccgnntcttgtg
gagactgttaaccaagacgtcgtcatctcgtcgtcgatgggcgtggcctatggccctaag
ttctcttcggatgccagtaaggtggtctcccggggcgccggcctatcaacggcctttgta
gagcagaagaacaccttcacagtggactgcagcaaagcaggaactaacatgttgatggtg
ggggtacacggacccaagaccccgtgtgaagaggtctacgttaaacacctgggcaacagg
atgtacaacgtcacctacaccgtcaaagaacagggcaactacatcctcattgtcaaatgg
ggggatgaaaatgtccccggcagccccttccatgtcaccgtcccctaa
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