Salvelinus sp. IW2-2015 (Arctic char): 112068008
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Entry
112068008 CDS
T05762
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112068008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112068008
03036 Chromosome and associated proteins [BR:
salp03036
]
112068008
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112068008
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112068008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CHASE3
Motif
Other DBs
NCBI-GeneID:
112068008
NCBI-ProteinID:
XP_023990759
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MFSPRPTPCSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFVYYADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGNYAETV
IDMGENLCNFVVAVRGGSFIVSSYKGQLMRLGADPSGKPLQRALQQXQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGEMGCLYTLTSCGLSKWEVDEVTEHQVLSWDSSRALTESVV
DAIWGSESNFEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLVLPRASSPAAFLYNXELVFACSTGTGRGGLPEE
KIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPE
ATAMETPTRMDSVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPLEEDGDGEVGGELD
LVVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILIALRKSNAT
VSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQA
AGQYRDTKASLYRASESTTAEPEYIPWTASSCLGGVRTVIARQHEVILRDVYPHADSELR
NGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDRYNTLEMEYTQRRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAHKTLYGQANMETRYFVKKKTLLALSKL
TALASDMPEAVMKKQVDDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLINLYI
CNDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWSSADGNDDPLEAA
KDSIFVKILIKLIQEGVPLQTYLPDFKDLLQLDEMEALKSKPTFEFVLRANYEHYLQAQI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgtcccaccccctgttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcctacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgactatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgtctactatgctgatctcatctcgatatca
tctcccagycctctggagactgccactgttcagtctatctctgtcatggcggtggctccg
gagggaacagcccggttctggcctagtttggcccacgaggggaattacgctgagactgtg
atcgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagtttyatc
gtgtcatcctataagggccagttgatgcgtctcggggcggacccctccggaaaaccgctg
cagagggcgctacagcagkrccagggggtgctttccggcatcggacgccgcgtctccagc
ctctttggcatgctcgccccgcttaccaacaacaatcttcacagtgttctgtgggtggga
gagatgggctgcctatatactctgacctcctgtgggctcagtaaatgggaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtcgtc
gacgccatctgggggtcagagagcaactttgaggaaatcaaggagggagtgaacgttacc
tacatggacatgcagctgagccaggatggcctggtagtgttggcagcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gccctccaggccatgaggctggtgttaccacgggcctccagccctgctgccttcctgtac
aacrmggagctggtgtttgcctgctccaccggtactggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccgtctgcgtggtgggggctgctgtgccaacctg
ccagtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctcc
atgctgcctgagactatggaggactccctctgcttctccttggctggggccggccctgag
gcaactgcwatggagactccgactaggatggattctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgttcctgcagttctgccggaatgacctggtgggggcccagaccatg
acagacgagctgttccccctggaggaggacggagacggggaggtgggcggggagctggat
ctggtggtgacccggatcaacctggacctggtggacgactacccagcctcagacccccgc
tgggccgagtctgtccctgacgagagtgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggatgcttcatggacttcctgctacaggtg
ggtctcctggaccggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgtgaacacgccgagaagctacaggcggccatgacgctgaagaaccaccacgcc
aagcacggcgagctggtcaatcgtgccatcctcattgccttgaggaagagcaacgcaacc
gtgtccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctca
gtcttcgagtgtctactagaagaggaggagaggactctgaaggagaaccctgtggactct
gtgaagtgggctgaagtggtgctcagtgtcaacaccatcatcaaggacatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcaccactgct
gagccagaatacatcccatggaccgcctctagctgtctgggtggggtgcgtaccgtcatc
gcccgccagcacgaggtgatcctgcgtgacgtgtaccctcacgccgactcggagctgcgc
aatggcctgaacgagcagctggcagcgctgctggatgtgctcctgggaggctacgttgcc
cagctgacctcactgagaccgggccggccgggccagcaggaccgctacaacaccctggag
atggagtacacgcagcgccgctctgagctgctcgcaccactgttggagctgggtcagtac
cagtgggtggcagcactggcagagaaatattgtgactttgacatcctggtccagatgtgt
gagcagactgacaaccagaatagactgcagcactacatggccaagttcgccgaccagaac
tttgcggacttcctgttccgctggtacatggagaagggaaagcggggcaagctgctctcc
cagcccatcgcccagcaccagcagctggccagcttcctgcagtcccacgaacacctcagc
tggctgcaccacatccacgtccacgacttcagcagtgcccacaaaaccctgtatggccag
gccaacatggagacacgttactttgtgaagaagaagaccctgttggctctcagtaaactg
actgccttggcatcagacatgcctgaggctgtgatgaagaaacaagtagacgacatggta
gagcaggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaa
caacagaacccagacaccatgcccctgctcagcgctcacaaccttattaatctgtatatt
tgtaatgacaacagacgagccaatgagtatgacttcaagaaggctctggatctactggag
tacatagacgaggaggatgctgtggacattgagggactcaagtgtgagatcttctgcaag
gccctcaagaaagacgactggtcgtctgctgatgggaacgatgaccctctggaggcagcc
aaggacagcatctttgtcaagatcctcatcaagctcatacaagaaggtgttcctctacag
acctaccttcctgacttcaaagaccttcttcaactggatgagatggaggctttgaaatca
aagcccacttttgagtttgtactgcgggccaactatgaacattacctgcaagcacagatc
tga
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