Salvelinus sp. IW2-2015 (Arctic char): 112068075
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Entry
112068075 CDS
T05762
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112068075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
112068075
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112068075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
WD40_2
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_IP5PC_F
AHSA1
Motif
Other DBs
NCBI-GeneID:
112068075
NCBI-ProteinID:
XP_023990853
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MANDGYNSSLCLPCVFSPKSRQYLASFAQDGRLRIWNTDSKILHQEYVPSAHLSATCTCI
VWGPCRISKEGPRRKKRKSEAGHVEELADLLALGTVAGSIIIYSAVKGALHCTLDGGHNG
GVNCVEWHPEDGLLYSGSDDSYIVEWDLQTSKTRCKWKADRASVTSLCVSPDGKLLLSAG
QTIKMWDLKTKEVYRKFTGHSTAVTNLRFATTRPPDSNGLYFLSGAAHDRLISVWQVQED
GNDKNSVVSFTLTDDPKHIDLFTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSGLEDNPVPVPLLAAALTADTLSLLLAYGSYLQPIIERLDVNTAERHVCLTRDVH
TTLTLAMETTVSKVKTPVVNAKSKALVPGLPGHQAPVKAGLGSEKRKKGTGTKEMSIEER
LGEIDLSLEKGGVRETPSLQTDNFAVLLVQGLESKDANILNNVFQTRKDNLIKKTVSRLP
IPAVLPLVEEITKRIQGHPYTAVLMVRWLRAVLMQHTSYLSSLPDLVSQLGVLYHMIESR
VKMFYKLTKLHSKLYLLMTQVVTGDSGVTDVDHKAKLVYEDASSDEDKASGDEGLPGEDS
DNWEEDGIEDREEETEEGMRTESKANGDSDMEPGNESDALQKETISK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatggatacaattcttcgttgtgtctaccctgcgttttctcgccaaaatca
cgccaatacctagcttcatttgcccaagatggcagactccgtatatggaacacagatagt
aaaatacttcatcaagaatacgtgccttcagcccatttgagtgccacttgtacctgcata
gtttggggaccatgccgaatctccaaggagggacctcggaggaagaagaggaaatcagag
gcagggcatgtggaggagttggcggatctgttggctctgggaacggtggcgggcagcatt
atcatttacagcgcagtgaagggggcactgcactgcacactggatggaggtcacaatggc
ggagtgaactgtgttgagtggcaccccgaggacggcctgctctacagcggctcagacgac
tcatacatcgtagagtgggacctgcagacaagcaagacccgctgtaagtggaaggcggac
cgtgcgtcagtgaccagtctgtgtgtgagtcctgatggcaaactgctgctctcagcggga
cagaccatcaagatgtgggacctcaagaccaaggaggtgtaccggaagttcacaggtcac
tccacagctgtgacgaacctgcgcttcgccaccacgcgtcccccggacagcaatggcctt
tacttcctgtccggggcggcccacgacagactcatcagcgtgtggcaagtccaggaggac
ggcaatgacaagaactcggtggtgtccttcaccctgacggatgaccccaagcacattgac
ctcttcacttccaacagcaaggaagaggcggtgaggctggcggttgtgtgtaaggatggg
cagcttcatctctttgagcactttctgaacgggccttgtaagaagccgctgtccccctcc
tgtacagtccagatgtctgggcttgaggacaaccccgtgcccgttcccctcttggccgcg
gccctcactgcggacacactcagcctcctgcttgcctatggcagctacctgcagcccatc
atagagagattggatgtgaacacagcggagagacacgtctgcctaacccgcgatgtccac
accactctcaccctcgccatggaaaccactgtttccaaggtgaaaaccccagtcgtgaac
gccaagagcaaagctcttgtccctggtcttcccggtcaccaagcgccggtcaaagcaggt
ttgggatccgagaagaggaaaaagggcacaggcaccaaagagatgtccatagaggagcga
ctgggagagatcgacttgtcacttgagaagggcggagtcagggaaaccccctctctgcag
acggacaacttcgcggtgctcctggtgcagggtctggagagcaaggacgccaacatcctc
aataatgtgtttcagacccggaaggataacttaataaagaaaaccgtttcccggttaccc
atccctgccgtcttgccattggtggaggagatcaccaagagaatacaagggcatccatac
acggcagtgctgatggtgcgatggctcagggctgttctcatgcagcacacctcctacctg
tcctcgttgccagacttggtgtctcagctgggagtgttgtaccacatgattgagagcaga
gtcaaaatgttctacaaactgaccaagctgcacagcaagctctacctgctcatgacacag
gtggtgacaggtgacagtggtgtcacagacgtggaccataaggccaagcttgtctacgag
gacgcgtcctctgatgaagacaaggcttcaggcgatgaaggccttccaggcgaagattct
gataactgggaggaggatggcatagaggatagagaagaagagacggaggaaggcatgagg
acggaatccaaagctaacggtgattccgacatggaaccgggaaacgagagcgatgctctt
caaaaggaaacgatctcaaaatga
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