Salvelinus sp. IW2-2015 (Arctic char): 112068083
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Entry
112068083 CDS
T05762
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112068083
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112068083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
112068083
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Others
Platelet activating factor
112068083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
UPF0182
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
112068083
NCBI-ProteinID:
XP_023990865
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MGIKEDLVVTTAVNFVGNGNFLDSAFRYTLFPVFYGVVFILGLIANSYVLFVLWRLRDAK
ALNEICIYMANLTVADLLFVCSLPVWIGYYHHGGVWLYGEFLCRVTGVFFFINTYCSVLF
LTAISINRYWAITRPLNAASSDHWCRGVVVTAVIWVVTLSMSVPYLLKTGIQKDERNVSR
CFEGYHLETDGEKRLVAATHLIIVGCFVLVFFLVVVCNLLIARALLAQSLTQARGSSSSK
PRGVKGRALQMLCAVVGVFVVCFLPHHMVQGPWTLAVLEIKEGWGSTEWNQKTRQWLNDA
HQVTLMLMGLNCLLDPVVYCFATRRFHMYIKDHLKKVGMGRGCSETAITHISIVECKNVS
QGLHREQLNN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggggataaaagaggacttagtagtgaccacggctgtgaactttgtcgggaacggaaac
tttctggactcggcgttccgctacaccctcttcccagtgttctacggtgttgtgttcatc
cttgggctgatagccaatagttacgtgctgttcgtgttgtggcgcctgcgcgatgccaag
gccttgaacgagatctgcatctacatggccaacctgactgtggccgacctcctcttcgtg
tgctccctccccgtctggattggctactaccatcacggtggcgtctggctctacggcgaa
ttcctgtgccgtgtcaccggcgtgttcttcttcatcaacacctactgctccgtcctcttc
ctcactgccatcagtatcaaccgctactgggccatcacgcgcccgctgaacgccgcctcg
tccgaccattggtgccgtggggtggtcgtcacagcggtcatctgggtggtcactctgtcc
atgtctgtgccatacctcttgaagacgggcatccagaaggacgagcgcaacgtgtcgcga
tgctttgagggctaccaccttgagacagatggcgagaagcggctggtggccgcaacccac
cttatcattgtggggtgcttcgtcttggtcttcttcctcgtcgtagtgtgtaatctgcta
atcgcccgggcgttactagcccagtcccttacccaggctcggggctccagttcctccaaa
ccccggggggtgaagggccgggccctgcagatgctgtgcgctgtggtgggggtgttcgtg
gtgtgcttcctcccccaccacatggtccagggcccctggaccctggctgtgctggagatc
aaggagggctggggcagcacggaatggaaccagaagaccaggcagtggttgaacgacgcc
caccaggtcaccctgatgctgatggggctcaactgcctcttagatcccgtggtgtactgc
ttcgccaccaggaggttccacatgtatatcaaggaccatctgaaaaaggtggggatgggc
agaggctgctcggaaacagccatcacacacatctctatagtggaatgcaagaatgtgagc
caggggctccatcgtgaacagctcaataattaa
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