Salvelinus sp. IW2-2015 (Arctic char): 112068180
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Entry
112068180 CDS
T05762
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112068180
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
112068180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
112068180
NCBI-ProteinID:
XP_023991016
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNEILEELIKTCQITTTTTTTTPSIPA
SRSAHSSPQLVPRGCSSPQPSQSLRPSSATDRDPTLGFRPVVIDGSNVAMSHGNKQVFSC
RGLLLAVRWFLERGIRDITVFVPLWRKEQPRPEAPMTDQHILHELEKRKILVYTPSRCVN
GKRVVCYDDRYIIKLAYESDGIVVSNDNYRDLQIEKPEWKTFIEERLLMYSFANDKFMPP
DDPLGRNGPTIDNFLRIKQWTPENKKERCPYGKKCTYGVKCKFYHPERSNQSQLSVADEL
RAKSKPPALTDREWSFLPSGLGQEAHIYTSLYEPDHTTNHLHRYPSTPPHLRKNEHSHSH
RASPSDQFTGQRETGSPALHHKSSHHFCPSPDTDEAFGSMEASLSRLYVQDQTNNTKGPG
VSYTYSSGVAGCSQGSGDVYPSSTYSSHSHCSNTQRLSLGGPSSGAHYAPQRLLQCGCDH
SQSCECSQCMYGHQHLQPQLRKSSYVVHSNPIHFTEQQYFQSPPPQRQSHSLPEHSLGQG
LSGERVEMTSSNEGKAPESEQRKSVKNQLSTLFPPSMVDYVMSLYPHTLNKSELVPLIQR
FRTSHVPF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccatagtgac
attgtgcgtgtgctagagagcctgcgtcatgacgcccagaccaacgaaatactggaggag
ctgatcaagacctgccaaatcaccactacaacaaccaccaccaccccatccataccagcc
agtcgctcagcccactccagcccacagctggtccctcgaggctgcagctctccccagccc
agccagtccctacggcccagctcagctactgacagggatcccactttgggattcagaccg
gtggtaattgatggaagcaatgtggccatgagccatggcaacaagcaagtgttttcgtgc
cgggggctgttgctggcagtcaggtggtttttggagagaggtatccgtgacatcacagtg
ttcgtgcctctgtggagaaaggagcaaccccgtcctgaggcccccatgacagatcagcac
atcctccatgagctggagaagagaaagatcctggtgtacaccccgtcacgctgcgtcaac
gggaagagagtggtgtgttacgacgaccgctacatcatcaaactagcctacgagtccgat
ggcatcgttgtgtccaatgacaactacagagatctgcagatagagaagccagagtggaag
acgtttatagaggaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctcct
gatgatcctctgggaaggaatggcccaacaattgacaactttctgagaataaagcagtgg
accccagaaaacaagaaggagcgttgcccatatgggaagaagtgtacttatggagtgaag
tgcaagttctaccacccagagcgctccaaccaatcgcagctgtctgtagcagatgagctt
agagccaagagcaaacctcctgctctgacagacagggagtggtcatttctcccctcaggc
ctcggccaggaggcccatatctacacatccctttatgagccggatcacactactaatcac
ctacacagatatccttccacaccgcctcaccttagaaaaaatgaacattcccattcccac
agggcttcgccaagtgatcagttcaccggccagagagaaacaggcagcccagctctccac
cacaagtccagccaccacttctgccccagcccagacactgacgaggcctttggctccatg
gaggcctccctgtccagactatatgttcaggaccagacaaacaacaccaaggggcccggg
gtgtcttacacatacagcagcggggtggccggctgcagccaaggcagtggggacgtctac
ccctccagcacttacagcagccacagtcactgcagcaacacacagaggctcagcctgggt
gggccttcctcgggagcccactatgccccccaaagactgctacagtgtggctgtgaccac
tcacagagctgtgagtgcagtcagtgcatgtacggccaccagcatctccagccacagcta
agaaagagctcctatgttgttcacagtaaccccatccatttcacagagcagcagtacttt
cagagtcctcccccacaaaggcagagtcatagcctcccagaacacagcttgggacagggc
ctctctggtgagagagtggagatgaccagttccaatgaaggtaaagctccagagagtgag
cagaggaagagtgtgaagaaccagctcagcaccctcttcccccccagcatggtagactat
gtgatgagtctgtacccacacaccctcaacaagtcagagctggttcctctgatccagagg
ttcagaaccagccacgttcccttctaa
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