Salvelinus sp. IW2-2015 (Arctic char): 112068308
Help
Entry
112068308 CDS
T05762
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
112068308
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112068308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_10
TPR_19
HrpB1_HrpK
Cep57_CLD_2
Focal_AT
Motif
Other DBs
NCBI-GeneID:
112068308
NCBI-ProteinID:
XP_023991180
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MEDTDEPMMGMLDTDSSESGDSPAMEGNGDGFLPYMPVLMHPVEWTMDQVPPDNLTTVIH
DTDSESDQSSPEVIKQHQDQQSDLGSVEQAVQHFQLASAKLFQEEDSDDQFCSPQVEQQN
PMEASSEEESNDGQNNQADATESLMQGEKMSEAVEQQQDPAQAQPPMIAEDGSPANMELE
ESKEMTEQGEPVEVPAEDPAVPTEPLIPAEYEKLVKGCEENPEDFNGWVYLLQYVEQENH
LGVVRKAFDTFFLHYPYCYGYWKKFADTEKKHGNVQVAEEVYRRGVQAIPLSVDLWLHYM
SFIKDNADHEDPETPGRIRAAYEHAVLAAGTDFRSDRLWEAYINWETEQEKLANVTAIYD
RILGIPTQLYSQHLQRFKEHVQNNNPKHFLSEEEFVQLRVELAKANVAAATNGEGEEATP
AEELPPGTEDLPDPAKRVTEIENMRHKVIESRQEVFNQNEQEVSKRWAFEEGIKRPYFHV
KALEKTQLSNWKEYLDYEIENGTPERVVVLFERCLIACALYEDFWTKYAKYIEGYSIDGV
RHVYKKACTIHLTKKPNIHLLWAAFEEQQGNIAEARRILKALEAAVPALAMVRLRRVSLE
RRHGNLEEAEALLREAIASGKNTSETSFYAVKLARQLLKVQRSLAKARKVLLDAIDKDQA
SAKLYLNLLELEYSGDVQQNEVDILACFDRALSSPLPLDSRLTFSQRKVEFLQDFGSDIN
KLVAAYDEHQKLLKENESAKRKAENGSQETESKRQRTDEHSGSGHMMQGDVQGNNSAYNY
NWYQQQYNNWGQNSWGQYNQYSQQYNQYYPPPPT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgatgagcccatgatggggatgttggacacagacagctctgagagtggg
gactccccagccatggagggcaacggagatggcttcctcccatacatgcctgtcctcatg
caccctgttgaatggaccatggaccaggttccccctgacaacctcaccacagttatccac
gacactgactcagagtcagatcagtcatcaccggaggtaatcaagcagcaccaggaccag
cagtctgatctgggatcagttgaacaagcagtgcagcacttccagctagcgagtgccaag
ctcttccaagaggaggattcagatgatcagttttgttctccccaggtagaacaacagaac
ccaatggaagcgtcgtcagaagaagaaagcaaygatggacagaacaaccaagcggatgcc
acagagtctctgatgcagggtgagaagatgtcagaggctgtagaacagcaacaagatcca
gcccaagcccagccaccaatgattgcagaagatggaagtccagctaacatggagctggaa
gaatccaaagagatgaccgagcagggggaacctgttgaggtaccagctgaggacccagct
gtccccacagagcccctcatccccgctgagtacgagaagctggttaaagggtgtgaggag
aaccctgaagacttcaatggttgggtctacctgctgcagtatgtggagcaagagaatcat
ctcggtgttgtgaggaaggcgtttgatacatttttcctgcactacccctactgctacggc
tactggaagaagtttgctgacactgagaagaagcatggcaatgtgcaggtggcagaggag
gtgtaccggcgaggtgtgcaggccatccccctcagtgtggatctgtggcttcactacatg
tccttcatcaaggacaacgctgaccatgaagacccagagacaccaggacgcattagagct
gcgtatgagcatgctgtgttggcagcagggacagacttccgctctgaccgtctgtgggag
gcctacatcaactgggagacggagcaggagaaactggctaacgtcacggccatctacgac
cgaatcctgggcatccccacccagctctactcacagcacctccagaggttcaaagagcat
gtgcagaacaacaaccccaaacacttcctgtcagaggaggagtttgtccaactgagggtg
gagctagccaaagccaacgtagcagctgcaaccaatggggaaggagaggaagcaacacct
gccgaggagctcccgccaggcaccgaagatctcccagatcctgcaaagagggtgacggag
attgagaacatgcgacacaaggtgatcgagtcgcgccaggaggtgttcaaccaaaacgag
caggaggtcagcaaacgctgggccttcgaggaagggataaaacgcccctacttccatgtc
aaagccctggagaaaacccagctcagcaattggaaggagtacctggactatgagatcgaa
aacggcactcccgaacgtgtggtcgttctgttcgaacgctgcctcatcgcctgtgctctt
tacgaagacttctggacaaagtatgcaaaatatatagaaggctacagcattgatggagty
agacatgtgtacaagaaggcgtgtaccatccacttgaccaagaagcccaacattcacctg
ctgtgggctgcgttcgaggagcaacaggggaacatagcggaggcgcgccgcatcctgaag
gctctggaggctgcggtaccagccctagctatggtgcgtctgcggcgggtcagcctggag
cggcgccacggcaacctggaggaggcygaggccctgctgagggaggcgattgcgtcgggg
aagaacaccagcgagacgtcgttctacgccgtgaagctggcccggcagctgctgaaggtg
cagagaagcctcgccaaggcccgcaaggtgctgctggacgccatagacaaggaccaggcg
agtgctaaactgtatctgaacctgctggaactggagtacagtggggacgtgcagcagaac
gaagtggacatcttggcctgcttcgaccgtgccctgagcagcccgctgcctctcgactcc
cgtctcaccttctctcagcgcaaggtcgagttcctccaggactttggcagcgacatcaac
aagttagtggctgcgtacgatgaacaccagaagcttctgaaagaaaatgagtcggcaaag
aggaaagcagagaatggctcacaggaaaccgagtcgaagagacagcgtacagacgagcac
tcaggctcagggcacatgatgcagggagatgtgcagggtaacaactctgcctacaactac
aactggtaccagcaacagtacaacaactggggacagaactcctggggacagtacaaccag
tattcccagcagtataaccagtactacccccctccacctacataa
DBGET
integrated database retrieval system
