Salvelinus sp. IW2-2015 (Arctic char): 112068343
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Entry
112068343 CDS
T05762
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112068343
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
112068343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
112068343
NCBI-ProteinID:
XP_023991231
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MRLPVIFFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGKKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPGYM
LELPENSPPGRILIDVNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPKTGVIKIQGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLMLNDTAEIMVPRNVGLGYIVTTVRAVDQDHGESGRLTY
EIXDGNEDHLFEMDPVAGEVRTAHAVWEEVAPAVELVVKVTDHGKPPLXAVAKLIIKAXT
GAMAXGESXASGEQQHWDXSLPLIXTLCIISXMLLAVMTXIAVKSKHQDKEAGNYNCRMA
EYSNSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMNVVSSPSLITSPICFDYQATSP
LPLTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMNRMSVIQTDNFPSEPNNVAN
RQPFAQSSSTFKDAERASLRDSGHGDSDLADSDQDTNKGCACNTSTREALKMKATAVNGQ
PLDQGQGRSVHCTDECRALGHSDRCWMPKLRVGGQADSGDNRTDLFIPVGMEAMVETEIY
GSLNRSAARKTLSTFGKEQRDSTILVANIKPYFKSQRARSPQLQECSSASSSPTKGNTPL
DSHTKGPREEVGRDGEGGSDSSAYGPPDGQCSPPHTELEEPSYMACDLRPKSLSNSLIHS
SEIRSGIISQECGGMECVSPNQRDSGD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtcatatttttccttctcttctgggctaaagcccggacactgaaaaat
ctcaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggaccggtggagaaaggaaaaaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgg
attgacagggagacattgtgcaaacgcaaccccaagtgtcagctctccatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccctcagatcacatcaatattgatatttcagagaacgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctggacaaaacggaataaagacttat
caggtcaccagagatgattacaatacattttctttggacttgaaattgaggggtgatgga
accatatatcctgaattggtggttcagcgccctctagatagggaagatcagtctcatcac
actctccttttgacagccattgatggaggggagtatccaagatcagggtccatgcaaatc
aatgtgagagttactgattcaaacgataatagcccagtatttgacaaacccggctacatg
ctggagcttcctgaaaactcaccacctggaagaatactgatagatgtgaatgcaacagac
caagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatctgataga
gtccaggagttgttttctattgatcccaaaacaggtgtcattaagattcagggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctggggcctaac
cccatccctggccattgtaagatttcagtcaaagtgcttgacaagaatgataactggccc
gtgataagttttgtctccgtccgccagggagctatcagtgaggcagcgcctccagaatct
gtcatagccctggtgagagtcactgataaggattctgggagaaatggccagctccagtgc
agggtgcttggcaatgtacctttcaggctgcaggaaaacaatgataatttttacactctg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaatggaataccctccttgaattacaccaaatcatttacagtgaaaatcttagat
gagaatgacaatgcgccacgtttcaccaagacagtgtacgtgctacaggtgcctgagaac
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagtttacacctac
gtgtctgtcaatcctaccaacggagccatttacgcctcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcagggtctcctcatatggagggc
agtgccacagtcagggtcagtgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctaatgctaaatgatactgcggaaatcatggtccctagaaatgtaggcctggggtac
atagtgaccacagtgagagcagtcgatcaggaccacggggagagcggtcgtctgacctac
gagatctsmgayggtaacgaggaycacctgtttgagatggaccctgtggccggcgaggts
aggactgcccatgctgtgtgggaggargtggccccagctgtygagctggtagtgaaggta
accgatcacggcaagcccccactmtktgcrgtggcraagctgatcattaaggccaycaca
ggagccatggcagsaggggagtccagsgcragcggggagcagcagcactgggacwtgtcc
ctgcccctcatcytcaccctrtgcatcatctcrstcatgctsctggctgtcatgactycc
atcgccgttaagtccaagcatcaagataaggaggctgggaattataactgccgtatggcc
gagtactccaactccaatcccccggttggaaacggcaagaagaagaggatcaacaagagc
gacatcatgctggtgcagagcgaggtggaggagagggactctgtgagcaggatgaacgtg
gtgagcagcccgtctctcatcacctcgcctatctgtttcgactaccaggcgaccagcccc
ctgcctctcacgctgcccaggtcagaggtcatgtatctgaaaaccacttttaacagcctg
acggtacctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatg
aatagaatgtcagtgatacagacggataattttccttcggagccgaataacgtggccaac
aggcaaccatttgctcaaagcagctcaacttttaaggatgcagagcgcgcgagcctccga
gacagtggccatggtgacagtgacctggctgatagtgaccaggatactaataaaggctgc
gcctgcaacacgtctaccagggaggccctcaagatgaaagccacagcagttaatggccag
cctcttgaccagggacaaggcagatcagttcactgcacagatgaatgtcgtgcgctgggc
cattctgacagatgctggatgccaaagttacgggtaggaggccaagcagacagcggcgat
aatcgcaccgaccttttcatcccagtgggaatggaggccatggtggagacagagatttat
ggcagcctcaaccgcagcgcagccagaaaaaccctcagcacgttcggcaaggagcagcgg
gacagcaccatcctagtggccaacatcaaaccctacttcaagtctcagcgtgcccgcagt
ccccagttgcaggagtgctcctctgcgtccagcagccccaccaaagggaacacacccctg
gactcccacaccaaagggcctagggaggaggtggggagggacggggaggggggctcagac
agcagtgcctatggacccccagacggccaatgttcaccgccccatacggaattggaggag
ccgtcatacatggcttgcgacctcaggcccaagtccctgtcgaacagccttatccacagc
tctgagatcagatctgggatcatcagccaggagtgtggggggatggagtgtgtcagtcca
aaccagcgggactctggggactga
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