Salvelinus sp. IW2-2015 (Arctic char): 112068344
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Entry
112068344 CDS
T05762
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112068344
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
112068344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
112068344
NCBI-ProteinID:
XP_023991232
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MMRGILTGWHRWIFGFITLDMLFVSLAESEGNTLKYQTKEERSPGTVIGNLAKDMSLSRS
FSSKTNFRMMKKFNNSFVRVRESDGELTVGERIDRERICRHTLQCLITFDVVSFSKERYN
LIHVEVEVKDINDNSPEFPNKEYTVEISENADVGFRISLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKELDRETQSSYAMELIATDGGNPFSSGSTKITIKVTDF
NDNRPVFDQNNFSVTLPEDAPVGFVLLDLNAVDPDEGLNGEVVYGFGKQVSAEIRALFEV
YSKSGRLTLKNPVDFETKKTYELDVQATDLGANPIPTICKIIINVKDVNDNAPEISITPM
TSISTGIAYISETADKDSLVALISTADRDSGVNSQVHCTLYGHDHFKLKQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKHVYEVSVVENNA
PGAYITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMK
HLEVXIQASDGGSPQLQSSAIINLKIVDQNDNAPSITEPILNKGSAEVFLPKHAPAGYVV
TQIKATDADEGINAQLSYNITEGGHLGFSINKVTGKLHVSCELNHDLSETLRVLVAVNDN
GTPSLTSTATIHLTLIEGTPPSVPAMVQNDSEEVFQWDMSIAIIIALAGSCSLLLLGIIL
ITTTCSRHKREKREAGCNDKVDIQHVENGESSHIDSLITNHKSNAFDVHPFPEKALLASS
NTIKTXPGDGRQEQECDFDNRIMESKLEGYSTLPGYRKETLRPITIWKGNSFTTISARDP
QFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSECKILGHSDRCWSPSASRP
NTSLSHGPHLSTFSKTASLPRNTLQRDTYYQQAHLPKTNGLQSVYEKVQHQEFDYILVCP
PTPARILETGEISLPEYGHS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtggcattttaacaggttggcatcgttggatttttggattcataacactagat
atgttatttgtctccctggctgagtctgagggaaatactctgaaataccagaccaaagag
gagcgaagtccaggaacagtgatcggaaacctggccaaggacatgtccttgagtcgctct
tttagctccaagactaattttagaatgatgaaaaaattcaacaattcttttgtcagggtg
agagaaagcgacggggagcttactgtcggggaaaggattgacagagagagaatctgcagg
cacactttacagtgtctcatcacttttgatgttgtcagcttttcaaaagagaggtacaat
ttgattcatgtcgaagtggaggtaaaagacattaatgataactctccggagtttccaaac
aaggaatatacagtggagatctctgaaaatgctgatgtggggttccgtatttctttggac
ccagccgaggacgcagacgttggatcaaactacatccaaagctatcaaatttctgtcaac
agtcatttttccattgatgtgcttttgagagcagatggggttaaatatgcggagttggtg
ctaatgaaagagttagacagggagactcagtcatcttatgcgatggagcttattgccacc
gacggaggaaacccatttagctcgggttcaacaaaaataacaataaaagtgacagacttt
aatgacaaccgtcctgtttttgaccagaataatttctcggtcactttgcccgaggacgca
ccggttggattcgttttattggacttaaatgcagttgatccagatgagggtttaaacgga
gaggtggtctatggattcggaaaacaggtttctgcggagatccgagcacttttcgaagtg
tacagtaaatccgggcgcctaacactcaagaacccagtggattttgagaccaagaaaaca
tatgagttagacgtgcaggcgactgatctaggagccaacccgatccccactatctgtaaa
ataataattaatgtcaaagacgttaatgacaatgccccagaaataagtattacgccaatg
acctccatctcaacgggcatcgcatatatcagcgagaccgcagacaaggacagcctagtg
gcgctgatcagcaccgcggacagggactcgggcgttaacagccaggtccattgcacctta
tatgggcatgaccatttcaaacttaaacaggcctatgaggacagctacatgattgtcacc
gcagcagccctggacagggagaagataagcgagtacaatttaactgtgatggctgaagat
ttcgggtcacctccattgagaaaaatcacacaatacaccataaggctaagcgacgagaat
gacaacgccccacactttactaaacatgtctatgaagtttctgtcgtagaaaataatgca
ccaggggcatatattacaactgttgaggccagagatgcagacttggggactaatggcaaa
attacatacagactattagacagtgttataatgggatcacctgtcaacacgtttgtatct
ctaaatgcaatctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaa
catctggaggtacycatccaggcaagcgatggggggtcaccccagcttcagagcagtgcc
atcatcaatctaaaaatagttgatcagaatgacaacgctccgtccatcacggagcccatc
cttaataagggatctgctgaggttttcctgcccaaacatgcacctgcaggttatgttgta
acccagataaaggccacggatgctgatgaaggcataaacgcgcagctgtcttacaatatc
acagaggggggacacttgggtttctccattaacaaggttactgggaagttacatgtgagt
tgtgagctgaaccacgacctgtctgaaacactgagagtccttgtggctgtcaacgacaat
ggaacaccttctctgacctccacagccactatacacctcactctcatcgaaggcacccct
cccagtgttcctgctatggtccaaaacgacagcgaggaagtctttcaatgggacatgtcc
atagccattatcattgccttagcagggagctgctccctcctcttgctaggcatcatcctg
atcactaccacctgcagtcgacacaaacgggagaagagagaggcgggatgcaatgacaaa
gtagacatacaacatgtggagaatggggagagcagccatattgattcattgatcaccaac
cacaaaagcaatgcgtttgatgtgcacccttttcctgagaaagcactgttggcctccagc
aacacaataaaaacagrcccaggtgatggcaggcaagaacaagagtgtgactttgacaat
aggataatggagagtaaattagagggttattcaacactgcccggctataggaaagaaacc
ctccgacccataaccatatggaagggcaactcattcacaaccatctcagccagagatcct
cagttcagtgggaaggacagtgggaaaggagacagtgactttaatgacagtgactctgac
atcagtggagatggacacaaaaaagactccccaccgataaacagtctctgggcctgcacc
agtgagtgtaaaatcctaggccactcagaccgatgctggagcccttcagcctctagaccc
aacaccagcctctcccacggaccacacctctcaacrttctccaagacagcctcgttgcca
cgaaacactctgcaaagagacacctactaccaacaggctcacctacccaagaccaacggt
ctgcaaagcgtctatgaaaaagtccagcaccaagaatttgattatattctggtttgtcca
ccaacaccagccaggatactagagactggtgagatatccctcccggagtatggacactct
taa
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