Salvelinus sp. IW2-2015 (Arctic char): 112068350
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Entry
112068350 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112068350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112068350
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112068350
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112068350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
fn3
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-RING_2
zf-RING_5
Pur_ac_phosph_N
Flagellar_rod
Motif
Other DBs
NCBI-GeneID:
112068350
NCBI-ProteinID:
XP_023991246
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILISHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPRETRRERXAXDXXAMTSPSEXVQ
XQFCEHDPPHEAVKTCVTXEVSYCEECLKATHPNKKPFTGHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPGCYLSERSEQEEADQ
EISTQTLDSNLSNLIKRNNELETLMGKLIQICQHVEGNASRQENKLLEECDLLMDIIHQR
RQIIATKINEGKATRLRKLAQQIATCKQIIERSSSLITQADHTLRETDHARFLQTAKSTC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPIIREELCTASY
DTVTAHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYIFMVKAINQAGSRSSVPGKLKTNSQPFKLDPKSAHKKLKISHDNLTVERDETSSKKS
HTQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWVGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDITFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCQD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgcttcaactgtgcccaccgtatcctgatctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgtccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactgaagcgtaacgtcactctgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagrgagact
cgccgrgagcgggrcgcccrygacygcwkggccatgacctcccccagcgagasggtgcag
tgrcagttctgtgagcaygaccctccccaygargccgtcaagacctgtgtcacctgrgag
gtgtcctactgcgargagtgcctgaaggccacccaccccaataagaagcccttcactggc
caccgtctgatcgagcccatgccggactgccacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagccgccctcagcgaccgctatgagaaa
ctcaagagaactccaggctgctatctcagtgagaggagtgaacaggaggaagcagaccag
gagatatctacgcaaaccttggactccaacctcagcaatctgattaagaggaacaatgag
ttggaaactctgatgggcaagttgatccagatctgccaacatgtggagggtaatgcatca
agacaagagaacaagctccttgaagagtgtgaccttctgatggacatcatacatcagaga
agacagatcatagccaccaagataaacgagggcaaggctacccggctgcgaaagctagcc
cagcagatcgccacctgcaagcagatcatcgagagatcgtcatccctcatcactcaagcg
gatcacaccctgagggagacagaccacgcccgcttcctgcagacagccaaaagcacctgc
gagagagtgtccatggcaacagcatcctctcagatcctgataccagagataaacctgaat
gacacctttgatacgtttgcgttggactttacaagggaaaagaaaatgctggaaagcttg
gattacctcacagcaccaaatcccccaataatccgggaggaattatgtacagcatcgtac
gacaccgtcactgctcactggacatcagatgacgagttctgtgtcgtctcctatgagctg
cagtatgccatcttcactggacaagccaatgtcgtcagtttgtgtaactcagctgacagc
tggatgattgtgcccaacatcaagcagaaccactacacagtgcatggactccagtgtggc
accaagtacatctttatggtcaaagctatcaaccaggcagggagtcgcagcagtgtacct
gggaagctcaagaccaacagtcagccgttcaagttggacccaaagtctgctcacaagaag
ctgaagatctcccacgacaacctgacggtggagcgagacgagacgtcgtccaagaagagc
cacacccaggaccgcttcaccagccagggcagctacggcgtcacggggaacgtgtacatc
gacagcgggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacacgagtgggtcggcaagaactcggcctcgtgggta
ttatctcgatgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgag
ccgtccccccacctgcgtcgcgtgggggtgttgttggattacgacgccgggtccctggcc
ttctacgatggcgctggctcacagcacctgtacacgttcgacatcaccttcgctcagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatc
ccagaccacctcgaggggacagactgccaggattaa
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