Salvelinus sp. IW2-2015 (Arctic char): 112068588
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Entry
112068588 CDS
T05762
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112068588
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112068588
04082 Neuroactive ligand signaling
112068588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112068588
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
112068588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112068588
NCBI-ProteinID:
XP_023991530
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MNLIFSRLLAYFYFGFQVILQFYIDPCHLHPQPCHILAQIGNTVRLGALLPTRQTARVQA
ALNRALAGLAQTGDNFLPFNLSLEVVPQEPAKGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEHGEPLKTQNRFHLQMATRIPPSGLSELLLAVLQRSGW
QEGMAVLCQGWEEDGLLELLDLQSHLGCGATRWQLRALLNLTRAGPAESQIQDFLSEHFR
GQGPSQIPPPAAVLLFGGDPECAAAVLRSAQDLGLTLPTVHWVLGYPLSPDALHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGRAVSAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLQRDAVGQPTWVTVGSWEGGRL
EGGRGGGRWRAGSPVAGSRVRVVTLVEHPFVFTREVDEDGNCPAGQYCLDAGTNSSDMLE
RYFSERATGNSTFLPTDYGKCCYGYCIDLLEKMSEDMRFEYDLYIVGDGKYGASKSGRWT
GLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLH
WSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRVFSYSSALNLCYAILFGRTVSS
KTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDAKLHHPSHGFRF
GTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLKVDPPQLDAFIMDKALLDYEVS
IDADYCKLLLWKAFAIEGYGIGLPQNSPLTNNVSEFISRYKSDGYMDMLHDKWYKVVPCG
KRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEHAFYHMVLPHIRRRQKYKYWLH
TSQKIHRALNQTYDDVKKKQGANTEKSCNSQKNQQPQPPPSPGASAKWNESSRDSAAAAA
KDKRVHFNLETLNSRRLLARAVAESEGGRGGSAGCGTNPRTNPATRVCANGGFGTSFASL
VLXLPSSSSSIPSSSSGVPLRPGELQELQERIDLIRDQLRTALARRAELQTSLAKEKAAC
SAPIVTGXTSVVVATAALPSTRCATTMTDPVLKSLPTVRTTPAIHTNEKS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattattggcatacttttacttcggattccaagtcattcta
cagttctacatcgacccttgtcacctccatccccagccgtgtcacattctggcgcagata
ggaaacaccgtgcgccttggtgcccttctgcccacccgccagacggccagggtgcaggct
gccctgaaccgcgccctcgccggtctcgctcaaactggggacaactttctacctttcaac
ctgagcctggaagtggttccccaagagccagcaaaaggagacccagagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgtgctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcatttttggaaataccttttataagc
atcattgaacacggagagcctctgaaaacacagaaccgcttccacctacagatggctact
cggatccccccgtcgggcctgtcggagctgctgctggccgtcctccagcggagcggctgg
caggagggcatggccgtgctgtgccagggttgggaggaggatggcctgctggaactactg
gacctccagagccacctgggctgtggcgccacccgttggcaactccgcgccctcctcaac
ctcacccgtgctggcccagcagaatcccaaatccaggacttcctttcagaacacttccgg
gggcagggcccaagtcagatcccaccgccggccgcggtgctgctgtttgggggcgaccca
gagtgtgcggcggcggtgctgcggagcgcccaggacttggggttgacgctgcccacggtg
cactgggtgctgggctacccactgagccccgatgccctgcactccatcggcctgcccctg
ggtctgctggcctacggtgaagtggagcgcaagccgctggacttctacatccgcgacgca
ctccagctggtaggccgggcagtgtcggctgccacagtggtgcgcccagacctggcgctc
atccagaacatggtcaactgctacgacaaacccaacaagcacgaggtgccctcctccgga
cagtaccttgccaggttcctgtccaacacgtcgttctcagggctgacggggccggtgtcg
gtgcagaggaacctatcccgagttctcacctctcagcgattccacatctggagcttgcag
cgggacgcggtgggccagcccacctgggtgacagtgggcagctgggaggggggccgcctg
gagggggggcggggtgggggccggtggcgagccggcagtcctgtggcaggcagccgggtg
cgggtagtcaccctagtggagcaccccttcgtattcacgcgggaggtggatgaggacggg
aactgtccggcaggacagtactgcctggacgcggggacaaacagctcagacatgctggag
cgctacttcagtgagcgtgccacgggcaactctaccttcctgcccacggactatggcaag
tgttgttacggatactgcatagatctgctggagaaaatgtcagaggacatgcgtttcgag
tacgacctgtacatcgtgggtgacgggaagtacggtgcatcgaaaagcggccgctggact
gggctggtgggcgacctgctcaatggcgtggccgacatggccgtcacctcattcagcatt
aactcagtacgcagccgtgtcatcgacttcacctcgcccttcttctccacctcgctgggc
atcctggtgcgcagcaaggacacggcggcgcccatcggcgccttcatgtggcccctgcac
tggtctatgtgggtgggcatcttcgtggcgctgcatatcaccgccctcttcctcaccctc
tatgagtggaagagcccgtttggcatgacgccacacggacgcaaccgcctgcgggtcttc
tcctactcgtcggcgctcaacctgtgctacgccatcctgttcggccgcacggtctccagc
aagacgcccaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgcctg
ctggtgctgtccagctatacagccaacctggccgccgtcatggtcggcgagaagaccttc
gaggagctctcggggatccacgacgccaagctccatcacccatcccatggtttcaggttt
ggcacagtgagggaaagcagcgctgaggagtacatgaagaagagtttcccagagatgcac
gagtacatgaggcgctacaatgagcccaccacacccgatggggtgtccaccctcaaggta
gatccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtgtcc
atcgacgcagactactgcaagctgctactgtggaaagccttcgccatcgaaggctatgga
ataggcctaccacagaactcccctctaaccaacaacgtgtcagagttcatcagtcgctac
aagtcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccttgtggg
aagagggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcagggctg
tttgtgctgctgtgtgtgggcgtggccacgtcactgctcaccctggctggggagcacgcc
ttctatcacatggtgctgccacacatccgacgacgacagaagtacaagtactggctccac
accagccagaaaatccacagagccctgaaccagacctatgacgatgtgaagaagaagcag
ggcgccaacacagaaaaaagctgcaacagccagaagaaccagcarccccagcctccccct
tcccccggrgcctcggccaagtggaacgagagcagcagggactccgctgctgcagctgct
aaggacaagcgagtccactttaacctggagaccctcaacagccgccgccttctagcccgg
gccgtggccgagtctgaaggggggagaggggggtcggctggatgtggcactaaccctagg
accaacccggccacacgggtctgtgcgaatgggggcttcgggacttcctttgccagcctg
gtgctawccctcccctcctcttcttcatccatcccttcttcctcctcaggcgttcctctg
aggccgggagagctgcaggagctgcaggagaggatcgacctgatccgggatcagctgagg
acggctctggccaggagggctgagctgcagacttccctggccaaggaaaaggctgcctgc
tccgcccccatagtgacgggaargacctccgtggttgtagctactgcagccctcccctcc
acccgctgtgccaccaccatgacagaccctgtcctcaagtccctgcccacagtccgcacc
actcctgccatacacaccaatgagaagagctga
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