Salvelinus sp. IW2-2015 (Arctic char): 112068629
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Entry
112068629 CDS
T05762
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04270
Vascular smooth muscle contraction
salp04625
C-type lectin receptor signaling pathway
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112068629
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112068629
09153 Circulatory system
04270 Vascular smooth muscle contraction
112068629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112068629
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112068629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
NTS
PH
Motif
Other DBs
NCBI-GeneID:
112068629
NCBI-ProteinID:
XP_023991577
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MSDTQSSITDRFPNKANRSSSILSKDHPPDKKPKSDKPAVSASHEFDPTDVLVQKSDCVL
AEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAERAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLLEGEAKVVFLGAQTGSSSVTSP
NSPGQPMGERPYSPHDRITSPLPIWEENNSVHNQKVHILQKMLAKEQEDLQAMKEEYSRN
PTPKLLKDIQEAKKHIPQLQGQLSKATGGAQDALRLGDGDDGSILDIDHTPSSSSDLSWS
SSMMSPVLRGFASASPESLCQRDLLSYHSPKSTPRDSFNSCHSPDPEDTPDLDSLSPSNV
SSPSRFVSQIIGAEDDYFDSDQEQVNGQCSCFQSMELLKSRPAHLAAFLHHVVSQFDPAP
LLCYLYADLCKQTNSKETRRVFMDFHNFFIDRGANLKVAVPESLSSDLDRRRTELIPEEL
NRQYVQMVQDTQLPDIQRNLEDFRQKRSMGLTLAEGELARLDTERVRDRVALERERACAE
NIITKIEDVLLTTQSTEEEKCTTMQYVILTYMKHLGVKVKEPRGLESKWVRINFLPKIKK
SIKPEKEGGEEKVKRTRFPSILGPPRRPSRVDPTSVGKAMDLNKPRPQKQLSQPSLGALE
HLEAGRLRASQSSEGSELIHSISTNATSPTNSTTNNNASDGGSRDSEFVGTPNSAFPKLS
EGLGDLDSLEYTPNTHFDYSLSPYSLDQLQEEDRESGVLEGTPKAIRRLDGLGSTEVQSE
DDQGGTDSEHDPLNWQQLVGREVLAGLQPHEIKRQEVINELFYTERAHLRMLKVLDNIFY
QKLTREXILPPADIKNIFTNLGDIVQLHVLISEQMAAIRKRSETSVIDQIGDDLLSWFSR
GEEEKIKQAVGTFCSNQPFALELIKSRQKKDSRFTSFMQEAESNRLCRRLQLKDIIPVEM
QRLTKYPLLLENIAKYTDDTVEKDKVKKAGDCCRKILNHVNQAVKESENKQRLEDYQRRL
DLSSLKQTENPVISELKNLDLTKKKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQD
ERLILKCHSKNLSGTADTKHIFSPIIKLNAVLVRSVATDNKSFFVLSMSDNGAQIYELMA
QTVSEQRMWQRQITQRADAMKVKPNSGIPLPQTDGERDGVEIITAGIAQLSKDPDRISSG
SSQSIEGCAASGGEMQTSLPDAKAFQGLKPEEEEPNREEGLYGDPDLADRLPFRMAIDGL
SDSDGLGFSPSRADDALKTLSALKQVLVTQLMSQDEGAGRSSSGGGRLLRTTSLRTPVDS
RARVAVQNGSGRCTQASHPEDPAQDLVSGDTGFFESPEDYGYLVLEGYGGSGESSTDDDL
QATGKQLSASRGCGAGDSGSA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacagtccagtatcactgataggtttcccaataaagcaaacagaagcagt
agcattctcagtaaggaccacccccctgacaagaaacccaaaagtgataaaccggcagtc
tccgcttcacatgagtttgaccctacagacgttctggtgcagaagagtgactgtgttcta
gcggagggaaagcccgagtcctgtgggcttgtccagcgatgtgtgatcattcagaaagat
gagaatggctttgggctgacggtgagcggagacaaccctgtgtttgtgcagctcgtcaag
gaggatggcgctgcggagcgtgcgggtgtacagacaggtgacaggatcatcaaggtgaac
gggaccctagtaacacattcgaaccacgtggaagtagtaaagctcataaaatcgggctcc
tatgtggccctcacagtgttggggcgaccccctgggttgccccagatccccctgttggag
ggcgaggctaaggtggtgttcctgggggcccagacagggtcgtcctctgtcacctctcca
aattcccctggacaaccaatgggggagcgaccatacagcccccatgaccgcatcacctct
cctctaccgatatgggaagagaacaacagcgtacacaaccaaaaggtgcacattctgcag
aagatgttggccaaagagcaagaagatttgcaggcaatgaaggaggagtacagcaggaat
ccgacgcccaaactactgaaggacatccaggaagccaagaagcacattccacagctgcag
gggcagcttagtaaggccactgggggagcacaggatgccctgcgattgggtgatggagat
gatggaagcattttggacatagaccacacaccttcctccagtagtgacctctcatggagc
agcagtatgatgtcccctgttctccgcggttttgcatctgcctccccggagagcctgtgc
caaagagacttgttgtcctaccacagcccaaagagcacgccccgagacagcttcaactcc
tgccactcccccgacccagaagacactccagacctggactccctgtccccctccaatgtt
agcagcccctcacgcttcgtctcccagatcatcggagctgaggacgactactttgactct
gatcaggaacaggtcaatggccagtgcagctgtttccagagcatggagctgctcaagtcc
agacctgcccacctggcagcgttcctgcatcacgtcgtctcccagtttgaccctgcaccg
ctgctctgctacctctacgctgacctgtgcaagcaaaccaactccaaagaaaccagacgg
gtgttcatggacttccacaacttcttcatcgaccggggagctaatttaaaagtagctgtt
cccgagtccctatcctctgaccttgaccggaggaggacggagctgatccccgaggagctg
aacagacagtacgtccagatggtgcaggacacccagctccctgacatccagaggaacctg
gaggactttaggcagaagcgcagtatgggcctaaccctggcggagggggaactggccagg
ctggacacggagcgcgtcagagaccgggtagcactggagagagaacgtgcttgtgctgaa
aacatcatcaccaagatagaggatgttctgttgacaactcaatccacagaggaggagaaa
tgcactactatgcagtatgtcatcctcacgtacatgaagcaccttggcgtgaaagtcaaa
gagccacgcggcctagagtccaaatgggtccgcatcaacttcctacccaagatcaagaag
agcatcaagcccgagaaggagggaggggaggagaaggtgaaacgaaccaggtttcccagc
atcctcgggcctcctcgccggccgagccgcgtcgaccccacgtccgttggcaaggccatg
gacctcaacaagccacgaccccagaagcagctgtcccagcccagcctgggggccctggag
cacctggaggcgggtcgcttgagggccagtcagtccagcgagggctcagagctcatacat
tccatctcgaccaacgccacctcgccaaccaacagcaccaccaacaacaacgcctctgac
ggaggcagcagagactctgagtttgttgggacccctaactctgccttccccaaactgagc
gagggtcttggagacctggacagtctagagtacactccaaacacacactttgactacagc
ctgagcccctatagcctggaccagctacaggaggaggacagggagagtggagttcttgaa
ggaacacccaaggctatcagaaggttggatggccttggttctacagaggtgcagagtgaa
gacgaccaaggaggcactgactctgagcacgaccccctcaactggcagcagctggtggga
cgagaggtcctggccggactccagccccatgagatcaagagacaggaagtcattaacgag
ctgttctacactgagagggcccacctgcggatgctcaaagtgctggacaacatcttctac
cagaagctcaccagagaggscatactgcctcctgccgacatcaagaacatcttcaccaac
ctgggggacattgttcaactgcatgttttgatatctgagcaaatggcagcaatccggaaa
aggagtgagacgtccgtaatcgaccaaataggagacgacttgctgtcctggttcagcagg
ggcgaggaggagaagatcaagcaggcggtgggcacgttctgcagcaaccagcccttcgct
ctggagctcatcaagagcaggcagaagaaggactcgcgcttcacctccttcatgcaggaa
gctgagagtaaccggctgtgtcgaagactccaactgaaggacatcattcctgtggagatg
cagaggctcaccaagtaccctctcctactggagaacatcgccaagtacacagatgacacc
gtggagaaagataaggttaagaaggcgggcgactgctgcaggaagatcctcaatcacgtc
aaccaagcggtgaaggagtctgaaaacaagcagaggctggaggactaccagaggcggtta
gacctctcgtctctgaagcagacagagaaccccgtgatttcagagctcaagaacctggac
ctgaccaagaagaagatggtccatgagggaccactgtcatggaaggtcaacaaggacaag
actattgagctgtacaccctgctcctggaggacatcctggtgctgctgcagaagcaggac
gagcggctcatcctcaagtgccacagcaaaaacctgtctggcaccgccgacaccaagcac
atcttcagccccatcatcaagctcaacgcggtgctggtgcgctctgtggccacagacaac
aagtcgttctttgttctctcaatgtccgacaacggggcccagatctacgagctgatggcc
cagaccgtatcagagcagagaatgtggcagcgccagatcacccagagagcggacgccatg
aaagtgaagccgaacagcggcatccccttacctcaaacggatggagagagagacggtgtg
gagatcatcactgcaggcatagcccaactcagtaaggacccggaccgcatctcctctgga
agcagccagtctatagagggctgcgctgcctctggaggcgagatgcagacctctctccca
gatgccaaagcatttcaaggactcaagcccgaagaggaggagcccaaccgggaggagggg
ctttacggggacccggaccttgcagataggctgcccttccgcatggccatagacgggctc
agcgactcggacggtctgggcttcagtccttctagagctgacgatgccttaaagacattg
tcagcgctgaagcaggtccttgtgacccagctcatgtcacaggacgaaggcgccgggcgc
tcctcctcggggggcgggcgtcttctcaggaccacgtccctgaggacccccgtggacagc
cgggcccgggtggcggttcagaacggctcagggaggtgcacccaggcaagccaccctgag
gacccggctcaggacctggtgtctggggacacgggcttctttgagtcccccgaggattat
gggtacctggtcttggagggctatgggggctcgggggagagcagcacggacgatgacctc
caggccacggggaagcagctgagcgcctcgcggggctgcggggcaggagactctggatca
gcctaa
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integrated database retrieval system
