Salvelinus sp. IW2-2015 (Arctic char): 112068839
Help
Entry
112068839 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112068839
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
112068839
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
112068839
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
112068839
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112068839
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112068839
Prokaryotic type
112068839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
bHLH_ILI
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
112068839
NCBI-ProteinID:
XP_023991823
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MWRSACGLSVRAAERAIHRKCSRRLYSHNAAKPPQSTPALRTQAEKERRRRDKEKAILSX
QHNNVEDQGMKWSEKERIAYRVSTPPGEKKDTTVPFPSSYSPEYVESSWYQWWEKEGFFT
PEINDRLPHAVNHSFSMCIPPPNVTGTLHLGHALTVAIEDALVRWRRMQGYKVLWVPGCD
HAGIATQTVVERRLFRERGKRRQDLSREEFLKEVWTWKKEKGRRSINQLRELGASLDWSR
ACFTMDPGFSSAVIEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEASILQINPEDPRY
QAVHGKQCRHPFTDRLLPIITDTMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIG
GDGTMTPLCGQWLEGVKRFDAREQVIDALTGYGLDHNMSLPVCSRSGDVIEPLLKKQWFV
RCGEMAQRAIQAVDEGQLEIVPHFYTKTWSSWLSNISDWCISRQLWWGHQIPAYRMTLPD
STDTQEELWVWGRSEEEARERAAGKYGVTADTITLTQDPDVLDTWFSSGLFPFAMLGWPQ
QTSDLRQFYPXTILETGSDLIFFWVARMVMLGTELTGQLPFKQVDNTSGDPPPCLFSLSS
PPQRLQEKVKEGNLDPRESMVAMEAQRKDFPKGIPECGTDALRFALCSYKAQGEDISLSV
SQVLSCRHFCNKMWQTVRFTLGVLEDRGAELGTVEQTSPLNSMDQWVCSRLYSTVLQCEQ
GFERYELHSVTAALHSFWLHSLCDIYLECIKPVLSQDSDAGALGQIDTVHTGRGSQREKQ
EVRAVLYHCVSVSLALLSPFMPFLTEELWQRLYLLRGEGGDSAVASLCLQPYPQSSQLAH
WHFPQEEADFTLVQEVVRVARSLRAQCGMTKEKPDMWAVCSPSQAQILLHFGPAVRTLGR
ITKLHLHCPQGAGSLSFPSAPPPPKGSAVGVVDHSCQLHLNVQGGVNVGKLSLQLSQRRE
KLLSKLEQSLSRTRVPNYLEKVPERVRVETENKISALEQELRNIEEQLSALQGPPKHNSG
QN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtccgcttgtggcctctctgtgagggcagcagagagggcaatacacagaaaa
tgttcacgtaggctctattctcacaatgcggcaaaacctcctcaatcaactcccgctctc
cggacccaggctgagaaagagaggcggaggagagataaggagaaggccatactgagcygt
caacacaataatgttgaagatcaaggaatgaaatggagtgagaaagagaggattgcgtac
agagtttcaacacctcctggggagaagaaagacaccaccgtgcccttcccttcgtcctac
agtcctgagtatgtggagagcagttggtaccagtggtgggagaaagaaggcttcttcacc
ccagagatcaatgacagactgccacatgctgtgaatcactccttctccatgtgtatccct
ccgcctaatgtgactggcacgctgcacctcggccatgcactcacagtggccatagaggat
gcattggtccgctggaggaggatgcagggctacaaagttctctgggtaccaggctgtgac
catgcaggcatcgctacacagacagtggtggagaggaggttgtttagggaacgagggaag
cgaagacaggacctcagcagggaggagtttctaaaggaggtgtggacgtggaagaaagag
aaggggaggagatctatcaaccagctgagggaacttggtgcgtctctggactggagcaga
gcctgcttcaccatggatccaggcttcagcagtgctgtgatcgaggcctttgtaaggctg
tgtgattctggtctgatctatcgctctgaggggctggtcaactggagctgtgctctggag
tctgccatctctgatatagaggctagtatacttcagattaatcctgaggaccctcgatat
caggcagttcatggtaaacagtgcagacaccccttcactgaccgactcttacccatcatc
actgacactatggtggacatggagctgggtacaggtgctgtaaaggttactccagcacac
gaccacactgacttcctgctttcccagcggcactctcttcctcgcctcactgtgattgga
ggagatggcacaatgacccctctctgtggccaatggctggagggagtgaagcgttttgat
gccagagaacaagtgatcgatgcactgacaggatatgggttagatcataacatgtcttta
cctgtctgcagtcgctctggggatgtcatcgaacctctgttgaagaagcagtggtttgtg
cgttgtggagagatggcccagagagccatacaggcagtagatgagggacagttagagatc
gttcctcacttctacaccaaaacatggagtagctggctgtccaacatcagtgattggtgc
atttccaggcagctttggtggggtcatcagattccagcctatcgaatgactctcccagat
tctactgacactcaggaggagctctgggtctggggccggagtgaggaggaggccagagag
cgggctgctggaaaatatggagtgacagctgacaccattacactgactcaggaccctgat
gtattggacacctggttctcctcagggctcttcccctttgccatgttgggctggccacag
cagacaagtgacctgaggcaattctacccanacactatcctggaaacaggaagtgacctc
atcttcttctgggtggccaggatggtgatgcttggcacagaactgactgggcagctgccc
ttcaaacaggtagataacacctcaggtgatcctccaccctgtttgttctctctctcctca
cccccccagaggctccaagagaaagtgaaggagggcaaccttgaccctcgtgagagcatg
gttgccatggaagcgcagaggaaagacttccctaaggggatcccagagtgtggtactgac
gcgctccgattcgctctctgctcttacaaggcccagggtgaggacatcagtctgtccgtg
tcccaggtgctgagctgtagacacttctgtaacaagatgtggcagacagtgagattcacg
ctgggtgtactggaggacagaggggctgaactgggaacagtggaacagacctctcctctg
aacagtatggaccagtgggtttgttctaggctctatagcactgtgctccagtgtgagcag
ggctttgagagatatgaactccactctgttactgctgccctgcactccttctggctgcac
agcctgtgtgacatctacctggagtgcatcaagccagtgctgagccaggactctgacgcc
ggagcgttgggtcagatcgacacagtgcacactgggagaggtagccagagagagaagcag
gaggtcagggctgttctctaccactgtgtgtctgtctctctggccctcctctctcccttc
atgcccttcctcactgaggagctgtggcagaggctctaccttctcaggggagagggtggt
gatagcgccgtggctagcttgtgtctacagccatacccacagtcttcacaactggcacac
tggcacttcccccaggaggaagcagacttcactctggtccaggaagtggtgagagtagcc
aggtccctcagggcccagtgtggcatgaccaaggaaaagcctgacatgtgggccgtgtgt
tcgcccagccaagcccagatcctgctccactttggccctgctgtacggaccctgggccga
atcaccaagctccacctccactgtcctcagggggccggctccctgtccttcccgtcggct
ccgcctccccctaaaggcagtgctgtgggtgtggtcgaccactcctgtcagttacacctc
aatgttcagggcggtgtgaatgtgggcaaacttagtctccagctctcccaacgcagagag
aagctcctctctaaactggaacagtccctctctcgaacccgtgtgccaaactacttagag
aaggttccggagcgagtgagggtagagaccgagaacaagatatcagccttggagcaggag
ctgaggaacattgaggagcagctgtcagcactacagggacctccgaaacacaactctggt
caaaattag
DBGET
integrated database retrieval system
