Salvelinus sp. IW2-2015 (Arctic char): 112068883
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Entry
112068883 CDS
T05762
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112068883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112068883
03036 Chromosome and associated proteins [BR:
salp03036
]
112068883
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112068883
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112068883
PBAF complex
112068883
GBAF(ncBAF) complex
112068883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Omp_AT
DUF919
Motif
Other DBs
NCBI-GeneID:
112068883
NCBI-ProteinID:
XP_023991867
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MATTSGGPNIGTPGTSQSPHTTMAQRKKDGSPSARYWESHDSLVQLETVRQWIGKHYKKY
VQADSPSCQALASLALQLLQFQEEVFGRRAEIRTHTKLPSRCFLDLRPGGGLCHILGSAY
KFKTDQGWRRFDLQNSSRTDRNVEMFTTLEKTLVQNSCLSRPVVYVDQEVDQNLNSRLAD
IVAKHQGSLTEDRTQASHHIYPRPAVTDQDWEWVRPVMRKDNYVLVHWGRHPDSYDSWLS
SSDVEGEVQEPPHTHRPWRVHAGWVLDTEVYNEWMNEEDYLVDDRNVPLILRRRVHVTDQ
QDRKFTPVKKRRRSPSPPSSDGKKKGGKKSGGFKRRGPKEEEEEVEEDLTKDMEDPTPVP
NMEEIILPKNVNPKKDSENTPVKGGMMTDLDEIEDDSLLPGGREDEEGREGLRLSDGEDN
ITEQTHHIIVPSYTAWFNYNCIHQIEKRALPEFFNGQNKSKSPEIYLAYRNFMIDSYRLN
PQEYLSSTSCRRNLTGDVCAVMRVHALLEQWGLVNYQVDAESRPLPMGPPPTPHFNTLAD
TPSGLAPLQHRPLQVSSSQQMLFFPERSVEKPSDSQNFGLRTDLYARKHPKSKGTSSGRD
WTEQETLLLLEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSASSLGPLA
YQPVPFSQSENPVMSTVAFLASVVDPRVASAAAKAALEEFCRVREEADKVLEFPALNEAE
KADVMDGEKMETDSGSQQPLQADRQTVLEPSGGERSVEGERVKRENAEMTVTEERDGDSG
GNLETDRGEKDEIAGRWREVERDEGRRLAELELVDGTVTTAAAAALGAAATKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQSFHSEQLK
HAEMKILQQREQQAPYTPQQHTGQSMPSQMMPTGGNSLTMAPRHPGAPNGMYPPAQPDGI
APTQPGPPSTAIHSRGAET
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacgtctgggggacccaacatcgggactcccgggaccagccagagtccacac
accactatggcacagcggaaaaaagacgggagtccgtccgcgaggtactgggagagccac
gactccctggttcagctcgagacggtgcgacagtggatcgggaagcactacaaaaagtat
gtgcaggcagactctccatcctgccaggctctagcctccctcgcccttcagctgcttcag
ttccaggaggaagtgttcggcagacgggccgaaatccgcacacacaccaaactaccttct
cggtgcttcctggacctgcgcccaggaggcgggctttgccacatccttggctctgcctac
aagttcaagactgatcagggctggagaaggtttgacctacagaactcctccaggacggac
cgtaacgtagagatgtttactactctagagaagaccctggtccagaatagctgtctgtcg
aggcccgtcgtgtatgtggaccaggaggtggatcagaacctgaacagcagactggctgac
atcgtcgccaaacaccagggttcgttgactgaggacagaacccaagcctctcaccacatc
tacccccgtccagctgtcacagaccaagattgggagtgggtgcgccctgtcatgcggaag
gacaactatgtgttggtgcactggggcaggcaccctgacagctacgatagctggctgtcc
tccagtgacgtagagggagaggtgcaggaacctccacacacacacagaccttggagggtg
cacgcaggctgggtgttggatacagaggtgtataatgagtggatgaacgaagaagactac
ctggtagatgacagaaacgttcctctcatcctccgccggagagtccatgtcacagaccaa
caggaccgtaagtttactccagtgaagaagagaagacgctccccctctcctccctcttcc
gatggcaaaaagaaaggaggaaagaagagtggtgggtttaagaggcgtgggccaaaggag
gaagaggaagaggtagaggaggatctgactaaagatatggaggatccaacacctgtccct
aatatggaagaaattatactgcctaagaatgtgaacccaaagaaggacagtgagaacact
cctgtcaaaggagggatgatgactgacctggatgaaattgaggatgactctctgcttcct
ggtggaagggaggatgaggagggcagagaggggctgcgtctgtcagatggagaagacaac
atcacagaacaaactcaccacatcatcgtcccgtcctacaccgcctggttcaactataac
tgtattcaccagatcgagaaacgagctcttccagagttctttaacggacagaacaagtcc
aaatctccagagatatacctggcgtatcgtaacttcatgattgactcgtaccggctgaac
ccccaggagtacctcagctccacctcctgcagacggaacctgacaggagacgtatgcgcc
gtcatgagggtccatgcgttgttggagcagtgggggttagtgaactaccaggtggatgca
gaaagcagacctctccctatgggaccccctcccacccctcacttcaacacactggctgat
acaccctcaggactggccccgctgcagcacagaccactacaggtgtcgtcctcccagcag
atgttattcttccctgagagaagtgtagagaagccctcagactctcagaactttggcctc
agaacagacctgtatgccaggaaacaccccaagagtaaaggaaccagttcagggagggat
tggacagaacaggagaccctcctactgttggaggcgttagaggtctatagagacgactgg
aacaaggtgtcagaacacgtggggtctcgtacccaggatgagtgcatcctccacttcctg
cgcctgccaatagaagacccttatctggaggactccgcctcctctcttggcccattggcc
taccagcccgttcctttcagccaatcagagaatccggtgatgagcaccgtggcgttcttg
gcgtccgtggttgatccccgagttgcctccgccgctgccaaggctgctctggaggagttt
tgtcgtgtgcgtgaggaagctgacaaggttctggagttccctgcactcaatgaggctgag
aaggcagatgtgatggatggtgagaagatggagactgactctggctcccagcagcctctg
caggcggatagacagacggttctagagcccagtggaggagagcgatcagtggagggagaa
agagttaagagagagaatgctgaaatgacagtcacagaggagagagacggcgatagcgga
gggaacctcgagacagaccgaggggagaaggatgagattgcgggacgatggagggaagta
gagcgggatgaagggaggagactagcagagctggagttggtagatgggacagttaccacg
gcagcagctgctgctctaggcgccgctgctactaaggccaagcacctagcagcggtagag
gagaggaagatcaagtctctggtggctctgctggtggagactcagatgaagaagctggag
atcaagctcagacactttgaggagctggagaccatcatggaccgagagaaagaggctttg
gagcaacagcgtcaacagctgttgtcagagcgacagagtttccactctgagcagctgaaa
catgcagagatgaagattctacagcagagagagcagcaagcaccatacactccacaacaa
cacacaggccagtccatgcccagccagatgatgcctactgggggaaactctctcaccatg
gcccctcgacaccctggagctcccaacggcatgtacccaccagcacagcctgatgggata
gctccgacgcagcctggtcctccaagcacagccatacacagccggggagcagaaacatga
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integrated database retrieval system
