Salvelinus sp. IW2-2015 (Arctic char): 112068933
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Entry
112068933 CDS
T05762
Symbol
gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112068933 (gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
112068933 (gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112068933 (gtf2h2c)
03400 DNA repair and recombination proteins [BR:
salp03400
]
112068933 (gtf2h2c)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112068933 (gtf2h2c)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112068933 (gtf2h2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
112068933
NCBI-ProteinID:
XP_023991932
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEILKEDESGSLKATVEEILFQAKRKRVFESHGQVRLGMMRH
LYVVIDTSRTMEDQDLKPNRLTSTLKLVEYFVEEYFDQNPISQVGIITTKNKRAEKLTDL
AGNPKKHIDALKKAKDSTCGGEPSLYNSLSLAMQTLKHMPGHSSREVLIIFSSLTTCDPA
NIYELVKTLKALKIRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFRELLMFHVKPPP
ATSSSECSLIRMGFPQHTIASLSDQDAKPSFSQAHLDSTGGGPGLSMGGYFCPQCQAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLEAFQESPLLLHHRERFCEACQGELKDKSVFT
CPSCCSVFCVECDLFIHDTLHCCPSCIHSRSAP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagccagagagagccaagcgttgggaggggggttatgagcgaacatgggag
atcttgaaggaggatgagtctggatctctcaaagccactgtggaggaaatccttttccag
gccaaaaggaaaagggtgttcgagagccatggacaagttcggcttgggatgatgcgtcac
ctgtacgtggtgattgacacctctagaaccatggaagaccaggacctgaaacccaaccgc
ctcacctctacactcaagctggtggaatatttcgtcgaggaatactttgatcagaacccc
atcagtcaggtgggcatcatcaccacaaagaacaagagagcggagaagctgactgacctg
gcagggaacccaaagaagcacattgatgccctgaagaaagcaaaggactctacgtgtgga
ggagaaccctctctatataactccctcagcctggccatgcagacactcaaacacatgcca
ggccacagcagcagagaagtcctcatcatcttcagtagtctcaccacatgtgacccagct
aacatctacgagctggtcaagactctgaaggctctgaagatccgtgtgtctgtgattggc
ctgtcagccgaggtgcgtgtctgcaccgtgctcaccagagagaccggggggtcgtaccat
gtgatccttgatgagagccacttcagggagctgctgatgtttcatgtgaagcctcctcct
gctacctcctcctccgagtgttccctcatacgcatgggtttcccccagcacaccatagcc
tctctatcagaccaggatgccaagccttctttcagccaggcccatctggacagcactggt
ggtggtcccggtctgtctatgggagggtacttctgtccacagtgccaggccaagtacact
gagctacctgtcgagtgtaaagtctgtgggctgacacttgtctccgctcctcacctggcc
cgctctttccaccacctcttccccctggaggccttccaggagagtcctctgctgctgcac
cacagagagaggttctgtgaagcctgccagggggagctgaaagacaaaagtgtgttcacg
tgtccgtcgtgctgcagtgtgttctgcgtggagtgtgacctgttcatccacgacacgctg
cactgctgcccctcctgcatccacagccgcagtgccccctga
DBGET
integrated database retrieval system
