Salvelinus sp. IW2-2015 (Arctic char): 112069277
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Entry
112069277 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112069277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112069277
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112069277
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
112069277
NCBI-ProteinID:
XP_023992345
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MDQQQQAVEKEDRDNLCLPASISSPTGVLFSYTGLRFLRALRLIQFSEILQFLNILKTSN
SIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQSLSYWECVYLLMVTMSTVGYG
DVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHI
TLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDL
ARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLN
IPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEG
VANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDIRESSTLINPGNHVKMQE
GTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRLIYSKMSVYQRMTLACCFD
CGRSERDCSRMSANVHHHSNAKDTLQQRGFPLSPVSLNDRSTTLRASKNNYNGYIKSMEE
EQQSAVSPKKKQGNGNTRNSPNSSPKMMRHDPLLMPGNEQIENMDVNVKKYDSTGMFHWC
QSKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALVGLRNLVMPLRASNFHYHELKPIV
FVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQSNIDDASL
QDKECILASLNIKSMQFDDSIGVLQATSQGFTLPGMDRSSPENSPVHGGLVRQASITTGA
NVPIITELVKPAGKVLPVISFSQDTSSGINIHIITELVNDLQCSSSWTSDDDDDPDTELY
LTQPFALWDGFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYS
TPQTLANRDRCRVAQLALYDGPFADLGEAVATGTCFVKALKTYNMLCFRNLPIEGRHLNT
QSHYKQCTKRYVITNPPYGFELVPSDLIFCLMQFDHNAGQSQASLTHSSHSSHSSSKKSS
SGHSIPATNRTNRAKSRDSRDKQKMNRMGQEKTCFTDEPENAAYPRKSHCSHTANPQVNH
QVNPQVNHQVNHQVNHQVNHQVNHQVNQNPYKSTNNLIPSIREVEDEY
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacaacagcaggccgtggagaaagaggaccgggacaacctgtgtcttcctgct
tccatttcatctcctactggggtacttttctcttacacaggcttacggtttttaagggcc
ttaagattgatacagttctcagaaatcttacagtttttgaatatattgaaaacaagcaat
tccataaaactggtgaacttgtgttcaatcttcataagcacatggctaacagctgcaggc
ttcatacatttggtggaaaactcaggggatccttgggaaaacttccaaaattcccagtca
ctttcctactgggaatgtgtctacttactgatggttaccatgtccactgtgggctatgga
gacgtgtacgccaaaactaccctgggacgacttttcatggtgttcttcatcctcggtggt
ttggccatgtttgcgagctacgtccctgaaatcatagagttaataggaaaccgcaagaaa
tatggtggttcctatagtgctgttaatgggagaaagcacatcgtggtctgtggtcatatt
acccttgaaagtgtgtccaacttcctaaaagacttcctacacaaggacagggatgatgtc
aatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagccttgttt
aaacggcacttcacccaggtggagttctaccagggatctgttctcaacccacacgacctg
gccagagtcaagatagagtcagcagatgcctgtttgatcctagctaataaatactgtgca
gaccctgatgctgaggatgcttccaacatcatgagggtgatttccatcaagaactaccac
ccgaagatcagaatcattacccagatgttgcagtaccacaacaaggcccaccttttgaac
attcccagttggaactggaaagagggtgacgatgccatttgccttgctgagctgaagctt
ggcttcatcgcacagagctgtctggctcagggcctctccaccatgctggccaacctcttc
tccatgaggtcctttatcaagattgaagaggacacgtggcagaagtattacctggaagga
gtagccaatgaaatgtatactgagtacctgtctagtgcctttgtgggcttatccttcccc
accatttgtgaactctgctatgtgaagctaaagctgctactgatcgctatcgagtacaag
tctgatatacgggaaagcagcactctcatcaaccctgggaaccatgtgaagatgcaggaa
ggaaccctggggttctttatcgccagcgatgccaaagaagttaagagggcactcttctac
tgcaaagcttgccacgatgacatcacagatcccaaaaggataaagaaatgtggatgcaaa
cgattgatctattccaagatgtccgtctaccagagaatgacgctggcatgttgttttgat
tgcggccgttcagagcgtgactgctctcgcatgtcagccaatgtgcatcaccatagtaac
gcgaaggacacccttcaacagcgtggcttccctctctctcctgtctctcttaatgatcgc
tcgaccactttacgtgcctcaaaaaataactataacggatatatcaaatcaatggaagag
gagcagcagtcagctgtttcgcctaaaaagaaacaaggcaatggaaacacgaggaactca
cccaacagttcaccaaaaatgatgaggcatgaccctctcctcatgccggggaacgaacag
attgagaacatggacgtgaacgtgaagaagtacgactccacagggatgttccactggtgc
cagtccaaagacattgagaaggtcatcttgacccggagcgaagccgccatgactgttcta
agcggccacgtggtcgtctgtatatttggagacgcaaagtcggctttggtgggcctcagg
aacctggtgatgcctctgagagccagcaacttccactaccacgagctgaaacccatcgtg
ttcgtgggttctctggagtacctgaagagggaatgggagacccttcacaacttccccaaa
gtctccatcttacctggcacaccattaagccgggccgatctgagggccgtcaatatcaac
ctctgtgacatgtgtgtcatcctgtcggccaatcagagcaatatcgacgacgcttcactg
caggacaaggaatgcatcctggcgtcactcaacatcaagtctatgcagtttgacgacagc
atcggggtgttgcaggctacctcccaaggtttcaccctgccaggcatggacaggtcctct
cctgaaaacagtccagttcatggggggttggtacgacaggcttccatcacaacaggagcc
aatgtccccatcatcactgaactagtaaaaccagcaggcaaagtcctacctgtgatttca
ttcagtcaggatacaagcagtgggatcaacatacacataataacagaactggtgaacgac
ctccaatgttccagttcctggaccagtgatgatgacgacgatcctgacacagagttgtac
ctcactcagcccttcgccctgtgggacggctttgcagtcagcgtgctggattccctgatg
agtgctacatacttcaacgataatatcctcaccctgatccggacgctggtaacagggggg
gccactccggagctggagggtctgttggcggaggagaacgcattacgaggaggctacagc
acgccgcagaccctcgctaaccgggacaggtgtcgtgttgcacagctagccttgtacgac
gggcctttcgctgacttgggggaggcggttgctacggggacttgttttgttaaagcgtta
aaaacatataacatgctttgctttcggaatttaccgattgagggacgccatctaaacaca
caaagtcattacaagcaatgcactaaacgatatgtaataaccaacccaccgtatggtttt
gagctggtgccatcagacctgatcttctgcctgatgcagtttgaccacaacgcgggtcag
tcccaggccagcctcacccacagctcccactcctcccactcctccagcaaaaagagctcc
tccggccattctatccccgccaccaaccgcaccaaccgcgccaagagcagggactcacgg
gataaacaaaagatgaatagaatgggccaagaaaagacatgctttacagatgagcctgag
aacgcagcctaccccaggaagtcacactgtagtcacacagccaacccccaggtcaaccac
caggtcaacccccaggtcaaccaccaggtcaaccaccaggtcaaccaccaggtcaaccac
caggttaaccaccaggtcaaccagaacccttacaaatccaccaacaacctcatcccatcc
atcagagaggtggaggatgaatactga
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