Salvelinus sp. IW2-2015 (Arctic char): 112069328
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Entry
112069328 CDS
T05762
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
112069328 (sox5)
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112069328 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
112069328
NCBI-ProteinID:
XP_023992403
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MIPVFPPDQRTLAVAAAQQGFLLPPGFNYKPGCSDPYPLQLVPTTMAAAAAAATPGLGQL
QLQQLYAAQLAAMQVSPGAKHSSMPQTNLNTHSPTNTHQEKSRSTPPPKPKVPTMKLGHH
STGSMKHSTAPSSIGGPPSRVNSIDLLSSLSSGGYLNDHEAVTKAFAEARQMKEQLKREQ
QVLDAKVAAVNNLSLNNGRSDKDKAALESLSHQLKQQSEDREKFNHAMMDFTMSGDSDGS
PSVSDSRMFREARGRGNSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW
KSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQ
EMRQYFTVGQQAQLPLSSAGVVYPGALSMAGLPSPQMPSEHSSLSSSPEPAAPPLQTPYH
PSLKGDETRVKQEALRLDDSNGDAYDDFDYEDEEGDYGSDNDNHQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtgttccctccagaccagaggactctggctgtagctgctgcccagcaaggc
ttcctgctgccccccggattcaactacaaaccaggctgcagtgacccttaccctctccag
ctggtccctactaccatggcagcagctgctgccgcggcmaccccaggcctcggtcaacta
cagctccagcagctgtatgcagctcagctggcagcgatgcaggtgtctccaggggccaaa
cacagcagtatgccccagaccaacctgaacacccactctcccaccaacacacaccaagag
aagagccgcagcaccccgccgcccaaacccaaggtccccaccatgaagctgggccaccat
agcaccggatccatgaaacacagcacagccccctccagcatcggaggaccaccgtccaga
gtcaactccatagacctgctgtcatccctgtcctccgggggctatctgaacgaccatgag
gctgtgaccaaggccttcgctgaggccaggcagatgaaggagcagctgaagagagaacag
caggtgttggacgccaaggtggccgccgtcaacaacctcagcctcaacaacgggcgctcc
gacaaggacaaggcagctctggagagtctgagccaccagctgaagcagcagtcagaggac
agagagaagttcaaccacgccatgatggacttcaccatgagtggagactcagatggcagc
cccagtgtgtctgattccaggatgttccgtgaggcccggggccgaggcaacagcgaaccg
cacattaaacgacccatgaatgctttcatggtctgggcaaaggatgagaggaggaagatt
ctccaggctttccccgacatgcacaactccaacatcagcaaaatcctcggttctcgttgg
aagtccatgactaacctggagaagcagccgtactacgaggagcaggccaggctgagcaag
cagcacctggagaagtacccggactacaagtacaaaccccggcccaaacgaacctgtctg
gtggacgggaagaagctgaggattggagagtacaaggccattatgaggaaccgccggcag
gagatgagacagtacttcactgtgggacaacaggcccagctgcccttgtcctcggcgggc
gtggtgtacccaggtgccctctccatggcaggcttgccctccccccagatgccctcggag
cactcctcactgtccagtagccccgagcccgccgccccacccctccagaccccctaccat
cccagcctcaagggagacgagacccgagtcaaacaggaggctctgcgattggacgacagt
aacggtgatgcgtacgacgactttgattatgaggacgaggagggagattatggaagcgat
aacgacaaccaccaataa
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