Salvelinus sp. IW2-2015 (Arctic char): 112069413
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Entry
112069413 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112069413
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
salp04031
]
112069413
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112069413
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112069413
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
112069413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-RING_5
zf-B_box
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
CEBP_ZZ
FemAB
Motif
Other DBs
NCBI-GeneID:
112069413
NCBI-ProteinID:
XP_023992518
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MAAAVGVNKQGTAATMDVCVRHVRGATSSTVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAIRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASSQLSMAED
ALTGMGESIIRCDEDESHTASMYCTVCATHLCADCSQLTHSTRTLAKHRQVPLADKPHEK
TLCPQHQVHAIEFVCQEELCQPGPLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRTFTEEVSEYSRKLVGIVQQIEGGERIVEDGIGMAHTEHSSVAIPQVPGTAESARSCV
RAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQ
DDCRVVLAKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKTTLFSLFQDNRVHIG
PKMEIRVVTLGLDSAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK
LRPLWKHYYLNTQAVVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGA
VSVEEMTELLSLHKLCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtgggtgtaaacaagcagggaaccgcagcaacgatggacgtctgtgtt
cggcacgtcaggggggccacaagcagcacggtgaaggtgttggagtgtggggtgtgtgaa
gatgtcttctctctccagggggacaaggtcccccggctgctgctctgtggtcacacagtc
tgtcatgactgtctgacccggctccccctgcatggtagagccatccgctgcccctttgac
agacaggtcacagagctgggggactctggtgtgtggggtctgaagaagaactttgccctg
ctggagcttctggagaggctgcaaaatggagcgtccagccagttgagcatggcagaggac
gccctaacaggcatgggagagtctataatccgctgtgacgaggacgagagccacacggca
tctatgtactgcacggtgtgtgccacccacctgtgtgccgactgctcccagctcacccac
tccacccgcaccctagccaagcaccggcaggtacccctggcagacaagccccacgagaag
acactatgcccgcagcaccaggttcacgctatcgagttcgtctgtcaggaggagctctgc
cagcctgggccgctcatgtgctgcgtgtgcaaagagtacggcaagcaccagggacacaag
catgcagttctggaggcagaagccaatcagatccgtgcgtctatcctggacatggcccac
tgtatccggacgttcacagaggaggtgtcggaatattccaggaagctggttgggatcgta
cagcagattgagggaggagaacggatagtggaggatggcatcggcatggcacacaccgaa
cattcgtctgtggctattccccaggtcccaggcacggcagagagcgcgcggtcctgcgta
cgggcctacttcgccgacctccacgagacgctgtgcagacaggaggagatggcgctcagt
gtagtggatgcacatgtcagggaaaggctcatttggctccggcaacagcaggaagacatg
accatcctactgtcccaggtgtccacagcctgcctgcactgcgagaagacactgcagcag
gatgactgcagagtggtcctggccaagcaggagatcaacagactgttggagactctgcag
aaacagcagcagcagttcactgagctggccgaccacatccagcttgacgctggtatcccc
gtcacattcaccaagactacattgttttctctgttccaggacaaccgggtccacatcggg
cctaagatggagatccgggtggtgaccctgggattggatagtgctgggaaaaccaccatc
cttttcaaactgaaacaggacgagtttatgcagcccatccctaccataggttttaatgtg
gagacagtggagtataagaatctcaagttcaccatctgggacgttggtgggaaacataag
ctacggcctctctggaagcactattacctgaacacacaagcggtggtgtttgtgattgac
agctgtcacagggataggctgatggaggcccacagtgaactggccaaacttctgacagag
aaggagctgagagacgccctgctgctcatcttcgccaacaaacaggatgtcccaggggct
gtgtcggtggaggagatgacggagctgctgagtctccacaagctgtgctgtgggaggagc
tggcacatccagggatgtgatgcccgcagtggcatggggctccacgagggcctggactgg
ctgtcccgacagctggtggctgcaggtgtactggatgtggcctag
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