Salvelinus sp. IW2-2015 (Arctic char): 112069511
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Entry
112069511 CDS
T05762
Name
(RefSeq) synaptopodin-like
KO
K21112
synaptopodin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112069511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
DUF6535
Motif
Other DBs
NCBI-GeneID:
112069511
NCBI-ProteinID:
XP_023992618
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MNEEKHRGDKVQDLKLPVKLPVKLPVKLPVKLPVKLPVKLPVKLPYKNPKLLKDNPGTVF
ADRYKEGEHLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRKQRVNAF
TLESCGERTREEERDGDNRNNNLTWEEEREGPSEGTETDRQLNRKNSSGTKPTLWSPSFG
CEVTGSDIMEDPGDEHIYEEVDVIQERHFQPVNEREEEEEERSGEREREEIYEDIEGEVK
DEIIPVNDNNTGTVREEVGMNRGSYPTAPSETRNGFHSTQGSAGEIQNGGRVSMSLSRQT
PTIVNRTARPFFSPPTVQLKSPEARSPVMDNNILPAPSYSTPPLPAFTATRPVAFSPPPP
LASCSMPPLPAFPIHPPPPSQSLSSPTPKSTVMFPRSTPAPQYNPPPTAAPVSQYRPPNP
LVTQYIPPPTSPRPNTFVPFTPQPIGQQNQQQPIKTGILEKGAAAIRRSSTARKSMFTFK
EKPVMAPNPELLSLVQGNDDRKKHGLRSVPDPAPEEELLALGAEASNFLAREEVKAEAAN
VPEWSSCLKSSRTREPRGQHQPEQTLTNASGKGAELFAKRQSRMEKYVVENQNVSGGGGG
QMRSPSPTASLPPSWIYPSNMPGRVKAIANNTDLSARLTRTLQTPQPANRRPSQQAPTPA
PVPEEPPLEXGCTKIEMDLSRHXPYQLNSSLFIFNPVQDSTSTLLSALPRGAPPPPKPLV
SSEAYSRQALRSPLEPREQQTYQALQESREQQTYQALQEPKEQQTYQALQEPREQQTYQA
LRESREQQTYSTTLFRSLENSISATLFRSLENSRPTKLFRSLENSRSP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggagaaacacagaggtgataaagttcaggatctgaagctcccggtgaagctc
ccggtgaagctcccggtgaagctcccggtgaagctcccggtgaagctcccggtgaagctc
ccggtgaagctcccgtacaaaaaccccaaactcctcaaagacaatcccgggacagtattc
gctgaccgctacaaagagggcgaacacctgacgcgtagtgccagcctatcagagaaggag
ttgaaggaggcgagggtgaggtcacagatcatcgcggcccagctgaccgtcccgtctggc
tgctccaattcacgcggcgtccagctcttcaaccgccgcaagcagagggtcaacgccttc
acgctagagagctgcggggaaagaacgagagaagaggagagagacggagataacaggaac
aacaacctgacatgggaggaggagagggagggtcctagtgaagggacagagacagacaga
caactgaaccggaagaacagcagcgggacaaaaccaacactctggtcgccatcctttgga
tgtgaggtcacaggaagtgacatcatggaggacccaggcgacgagcacatctacgaggaa
gtggacgtgatacaagagagacacttccagccggtgaacgagagagaagaggaggaggaa
gagaggagtggagagagagaaagagaggagatatacgaggatattgagggtgaagtgaag
gatgagattataccagtaaatgacaacaacaccggtacagtcagagaggaagtggggatg
aataggggctcataccccacagctccctctgagacccgtaatggcttccacagcacccag
ggctctgctggagagatccaaaatggcgggcgagtttctatgtccctgtccagacagacc
cccaccatcgtcaaccggacagccagacccttcttctccccgcccaccgtacagcttaag
tccccagaggccaggagtcctgtcatggataacaacatactcccagccccctcctactcc
actccccctctccctgctttcactgccactcgccctgtcgccttctcccctcctccccct
cttgcttcatgctccatgcctcctctcccagccttccccatccatcctcctcctccctct
cagtctctctccagtcctactcccaagtctaccgtcatgttccctaggtctacccccgcc
ccccagtacaaccctcctcctacagctgccccagtgtcccaatatcgaccccccaaccct
cttgtcacccaatacatccctcctccaacctcccccagacccaacacctttgtccccttc
acccctcagcctattggtcaacagaaccagcagcagccaatcaaaacgggcattctggag
aaaggggcggcggccatcagacgatcgtcaacagccaggaagtccatgttcacctttaag
gagaagcctgtcatggcacccaaccctgaactcctctctctggtccaggggaacgatgac
aggaagaagcacggcctccgctccgttcccgacccagccccagaggaggagctgctggct
ctgggggccgaggcctctaacttcctagccagggaggaggtgaaggcggaggctgccaac
gtgccggagtggtcctcctgtctcaagagctccaggaccagggaacccagggggcagcac
cagccagagcagaccctgaccaacgcatcagggaagggggccgagctgttcgctaagcgc
cagtccaggatggagaagtacgtagtggagaaccagaatgtctccggtggtggaggtggt
cagatgaggtctccgtctcccaccgcgtctctgccgccgtcttggatctatccatctaat
atgcctggccgggtcaaagctatcgctaacaacactgacctcagcgccaggctgacacgg
accctccagacccctcagcccgcgaacaggaggcccagccagcaggctccaaccccggcc
ccggtccccgaggaaccacccctggagwacggctgcaccaagatagagatggacctctcc
aggcackagccctaccagctcaactcctccctgttcatcttcaacccagtccaggactct
accagcaccctgctgagcgctctgccccgaggggcccctccaccacccaaacccctggtc
tcatctgaggcctactccaggcaggccctccgctctccactcgagcctagagaacagcaa
acctaccaagctcttcaggagtctagagaacagcagacataccaggcccttcaggagcct
aaagaacagcagacctaccaggcccttcaggagcctagagaacagcagacctaccaggct
cttcgggagtctagagaacagcagacctacagtaccacactcttcaggagtctagagaac
agcatatctgccacgctcttcaggagtctagagaacagcagacctaccaagctctttagg
agcctagagaacagcaggtctccataa
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