Salvelinus sp. IW2-2015 (Arctic char): 112069572
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Entry
112069572 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: negative regulator of reactive oxygen species-like
KO
K26317
transforming growth factor beta activator LRRC33
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112069572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
112069572
NCBI-ProteinID:
XP_023992677
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MLIHGLFPTLLCLTLWSLCSLLMPAFCQSHHSPCRLTQKTALCSNRELSSVPEGLPDSIE
DLHLNHNHIQTLQDDSLSRYVSLRTLNCADNRLETAGSKLFHNSPHLESLNLAANNLHVG
YRQTSLALLTLSRLRVLDLSENQLTEDMVSVLLQNMTSLEYLNLSRNLLLRLDESSFSDL
HQLRELDLQRNMLFEIDESFDHLHKLQRLNLAFNYLPCLVHFHMTQLVVLNASHNAIEWF
IANQDLQEVFQLETLDLTDNNLLFFPFLPTHSRLRNLHLSQNRVSFYEHLADTAAYPSWK
TSVQFYNLRGNMSNVTAKLWDESLHGDISSLDLLDLSGNQVGYFPQGFISKMPSLTRLRM
WTNCLEVLNLTLEKLPGTLYELDVSNNRLTELHADQVSLRKLGNLSFLNLSQNDLQSLPA
QLFSSLTSISSVDISYNRVGVCPLEAWGGGTGGGNQSDCVVWRNIISLRYLHLSGCNLGR
LPSLAFVGTPLTHLELSNNPELVIGPRSIKDLSRTLHHLGLGNTGLKHFDFSPFHHLKSL
NISRNSLTQLPASLQHLELRLLDLRDNKLTTVPSAQANVLATKLHTVFLNGNTFNCCQLD
WYRTFERVKTVTIMDLSDISCQDLTKRTHRVVLVDSLICGGSDGESVYWYILLFIVPVLC
LVGMSVIFLLTFRPRLLPMAIKNTCWSHLPCVVEEKSNKEDTGRVQIPILEF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctcatccacggcctcttccctaccctgctctgtctaaccctctggtccctgtgtagc
ctcctgatgcctgccttctgccagtctcaccacagcccctgcagactgacccaaaagact
gctctctgtagcaacagggagctctcgtctgtacctgagggcctacctgacagcatagag
gacctccacctgaaccacaaccacattcagacgctacaagatgactccctctcccgttac
gtctcccttcgtactctaaactgtgccgacaaccgcttggagacggcggggtccaagctc
tttcacaactcacctcatctagagagcctcaatctagctgccaataaccttcacgttgga
taccggcaaactagcctggcgctgctcaccttgtctagactcagagttctggatctgtca
gaaaaccagcttacagaggacatggtctccgtcctcctccagaacatgacgtcgctggag
tacctcaacctttccaggaacctcctgttgaggctggatgaaagctccttcagcgacctc
caccagctcagagagctggacctgcagaggaacatgctgtttgagattgacgagtccttc
gatcacctgcacaagctccagagactcaacctggccttcaactacctgccctgcctggtg
cacttccacatgacccagctggtggtcctcaacgccagtcacaatgccattgagtggttc
atagccaaccaagacctccaggaagtcttccagctggagaccctggatctcacagacaac
aacctcctcttcttcccctttctgcccacccacagccgcctgaggaacctccatctgtcc
cagaacagggtgagcttctacgaacacctggcggacaccgctgcctaccccagctggaaa
accagtgtccagttctacaacctgaggggcaacatgagcaacgtcacagccaagttgtgg
gacgagagcctgcacggggacatctcctctctagacctgctggatctgagtggaaatcag
gtgggctacttcccccaagggttcatcagcaaaatgccaagcctgaccagactcaggatg
tggacaaactgtcttgaggtcttgaatctaactctggaaaagctgccggggacgttgtac
gagttggacgtgagcaacaataggttgacagagctccacgccgaccaagttagtttgaga
aagctaggcaacctgagcttcctgaacctgagccagaatgacctgcagagtctacctgct
cagctgttttcctctctcaccagcatcagctctgtggatattagctacaacagagttggc
gtgtgcccccttgaggcatggggtgggggcacaggtgggggtaaccaatcagactgtgtc
gtttggagaaacataatttctctgagatatctccacctatcagggtgcaacctggggagg
ctgccatcattagcattcgtagggacacccctaacacacctggagctgtctaacaaccca
gaactcgtcatcgggcccagatcgataaaagacctcagcagaactttacaccatctagga
ttgggaaacacaggcctgaaacactttgacttctctcctttccaccacttaaagtctttg
aacatttccagaaactctcttactcagctccctgcttcactgcaacatctggagctgagg
ctgctggacctgagggacaacaaactgaccaccgtcccctcagctcaggctaacgtgtta
gccacgaaactccacactgtttttctcaacggaaacactttcaactgctgccagttggac
tggtacaggacgttcgagagggtaaaaactgtcactatcatggacctctcagatatttca
tgtcaggatctgaccaaaaggacacacagagtggtgcttgtagactctctaatatgtggc
ggtagtgacggagagtctgtgtactggtacatcctgctgtttatcgtacctgttctctgt
ctggttggaatgtctgttatcttcctgctcacctttaggcccagactgcttcccatggcc
attaaaaatacatgctggagtcaccttccctgtgttgtggaagaaaagtccaataaagaa
gacactggccgtgtccaaatacccatactagagttctaa
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