Salvelinus sp. IW2-2015 (Arctic char): 112069807
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Entry
112069807 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112069807
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112069807
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112069807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_4
zf_RING_Vps8_fungal
zf_RING_Vps8
PHDvar_NSD
PHD
Prok-RING_4
DUF7027
zf-RING_16
RINGv
PHD_NSD
zf-C3H2C3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112069807
NCBI-ProteinID:
XP_023992947
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPANACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKSAI
VHNVDSDDLISMGSNDMDILKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPL
EYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDVYDVC
AICLERSDEDGDKLRVXPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSAGDSDSDSEGD
SGAEENEVSESTPLLRSLASTSGHSFGTMSGASRSEPDQESSEYEDTSDDSEEDVTVETE
TVVVQLQEPRPDDHDAPDWLA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctcccttgggatgctgatgctgtccgccacacagatctacaccatcttcacc
gtgcagctcttcgccttcctcaacctgctgcccgttgaggccgacatctctgcctacaca
tttgacaacaaaacaggtaattttgatgacctgcctgcacgctttgggtaccggctgccc
agcgatggactcaagggctttctgattggtgcacggcccgcaaatgcctgcgagcccatc
gacccaccccctatccgggacaacctcactggcgccttcatcgtgctcatcaagcgcttc
gactgtaactttgacatcaaggtgcttaatgcccagaaggccgggtacaagtcggccatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgacatggatattttg
aagcaaatcgacattccatcagtgtttgttagtgaagagactgccaactccctgaaagaa
gactacacatacgacaaagggggtcatgtggtcctcatgccagacttcagcctgcctctg
gaatactacctgattcccttcctcatcaccgtgggaatctgcctcatcctcatcgttgtt
ttcatgatcaccaagtttgtccaggacagacacagggctcggagaagccgtttgcgcaag
gaccaactgaagaaactacccattcacaagtacaagaaaggcgacgtctacgatgtgtgc
gccatctgcctcgagcggagtgatgaggatggagacaagctccgggtcnctccctgctcc
cacgcttaccacagcaaatgtgtggacccctggctaaccaagaccaagaagacatgtccc
gtgtgcaagcagaaggtggtcccctctgcaggtgactccgactccgactcggagggcgac
agcggagccgaggagaacgaggtgtctgagagcaccccactgctgcgttccctggcctcc
accagcggccactccttcggcaccatgtcaggrgcctcgcgctccgagcctgatcaggag
tcctcagagtacgaagacaccagcgacgacagtgaggaggacgtcaccgtggagactgag
acggtggtggtccagctgcaggagcctcgtcccgatgaccatgacgcgcctgattggttg
gcctga
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