Salvelinus sp. IW2-2015 (Arctic char): 112069842
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Entry
112069842 CDS
T05762
Name
(RefSeq) integrin alpha-3-like isoform X1
KO
K06482
integrin alpha 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112069842
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112069842
09142 Cell motility
04820 Cytoskeleton in muscle cells
112069842
04810 Regulation of actin cytoskeleton
112069842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
112069842
04515 Cell adhesion molecules [BR:
salp04515
]
112069842
04090 CD molecules [BR:
salp04090
]
112069842
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112069842
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin alpha subunits
112069842
CD molecules [BR:
salp04090
]
Proteins
112069842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Collectrin
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
112069842
NCBI-ProteinID:
XP_023992985
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MAIFQLHRFSTNTYYLLLLVLLCTVHILQGFNLDVRFPVVKEGKTPGSLFGFSVALHKQM
VGEKRYLLLVGAPKEKAESGVKASETGDVYTCPVNVAQSDCTRMNLIGSDPDLIEGEDRV
EDMWLGVTVASQRQPGGRILTCGHRFVKLHGVLKLRQMIGKCYIRGNDLNYNETDMHWQN
PDQVCSHTKDITGEVMCNMGISAAITDTEVIVGAPGSFEWQGNVHVSWMNPNVIYDTKRS
SFPNFGNRRHIYIGYSVAEGRGLLSQSQDTVVTGAPKDNKDDAKGSVILTVKKKSTSGDG
DQLKPYLTLRGEQMGSYFGNSLAVADLNNDGWMDLIVGAPFYFDRKKELGGAVYVYMNEN
GSFRQNSSIILRGPRDSAFGMAVAAIGDVNQDGFQDFAVGAPFHGTGRVFIWTGSAEGIS
QEPSQVIEGEDIAGGGFKTFGYSINGGLDVDENRYPDMVVGSLDDRVALLRARPVIHLIK
TLEVTPEIVDPKDCDNCMEVEVCFNYTLSTGDKNFRKNVTVKYTVEADLTRHNHRVRFQD
NGLDSYTGFLSMPSAKCKTLRLGLVSPIRDKVEPVVFSLNVSLHEGHPKARQSLQNLDAF
PVLSEGKASHVKKEIHFQKACGPDNTCQSNLHMKAEFANEEQTPFPSHDGHQILQYSASV
KKVMLVVDVTNFQSPGKPAEDAHNAMLNVTIPPSLIYSAFRSKLWNNNPAIKCSAEDMVV
LCELGNPFTSNQMDQVLIIFQTSEISLDTREIRSTLQLSTLSEQSNVQPLPLVMVVEYTL
EASFALAQYTDHTHFSGEIMGESGMKTAGDVGSPVEFTFKVNVLGKPLGSLGNLEVEFDW
PWEVANGKWLLYLTEIQTKGTSDSHCVPPGAIVNPLKLMLPESKARRRRKREEGSTEEVH
PREPQASLNLKGTRKKSFKLDCVTGTAHCVKFICPLRNMNNTATIIVRARVWNSTMLEDY
REAWRVTVNGKATLKLVTDKPTIRMNTESTEFTLNIDPELGEESTYQVPLWIIIVSAVAG
VLLLAFIILLMWKCGFFKRPNHFKMMPIHQGVKIGKEERYQVNEGFLIEEPNPNKRKKHW
ITNWTEMQHYY
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcaatctttcaactacaccggttctctacgaatacctactacctcctgttgcttgtc
ctgttgtgcacagtgcatattcttcaggggttcaacctggatgtgcggtttcctgttgtc
aaggaaggaaaaaccccgggaagtctctttgggttctcggtggcacttcacaaacagatg
gtgggagagaaaagatacctactacttgttggcgcacccaaagagaaggcagagtctggc
gtgaaggccagtgaaacaggagatgtgtatacctgccctgtaaacgttgcccaatcagat
tgcaccaggatgaacctgattggctcagaccctgacctcattgagggtgaggacagagtg
gaggatatgtggctgggggtaaccgtggccagccaaagacagccagggggcagaattctg
acctgtggccatcgctttgtgaagttacatggcgtattgaagctgcgtcagatgattggg
aagtgttatatccgtggtaacgacctgaactataatgaaacagacatgcactggcagaac
cctgatcaggtgtgcagccacactaaagacatcacaggcgaagtcatgtgcaacatgggc
atctctgctgccatcactgacacagaggtcatcgtgggcgcacctggcagctttgagtgg
caaggcaatgttcatgtctcctggatgaatccaaatgtcatctatgacaccaagagaagc
agcttccccaactttggtaatcgacggcacatttacataggctactcggtggcagagggc
cgaggcctcctcagccagagccaggacacagtggtgacaggggctcctaaggataacaag
gacgacgccaaaggctcggtcattctgactgtgaagaagaagtcgacgtcaggggacggg
gaccagctgaaaccctacctcaccctgagaggcgagcagatgggctcatactttgggaac
tccctagccgtggcagacctcaacaatgatggttggatggatctgatcgtcggagccccg
ttctattttgatcggaagaaggagcttggtggagcggtgtacgtctatatgaacgagaac
ggctccttccggcagaactccagcatcatactccgaggccctagagactctgcgtttgga
atggctgtggctgccattggagatgtcaaccaagatggctttcaagattttgcggtgggc
gctccgttccatggaacaggcagggtgttcatctggacaggcagtgctgagggcatctct
caggagcccagtcaggtgattgagggggaggatatagctggaggtgggttcaagacgttt
ggctactccatcaacggagggctggatgtggatgagaaccgctaccccgacatggtggtc
ggctcactggacgaccgcgtagccttactgagggcccgcccagtcattcacctcattaaa
actcttgaagtgacgccagagattgtggacccgaaagactgtgacaactgtatggaggta
gaggtctgtttcaactacacactgagcactggggacaagaacttcaggaagaacgtcact
gtgaagtacactgtggaagccgacctaacacggcacaaccaccgggtccgtttccaagac
aatggcctggacagctacactggtttcttgtcaatgccatctgccaaatgcaaaacgctg
aggctcggactagtgagtcccatccgagacaaggtggagcccgtagtcttctccctgaac
gtatccctccatgaggggcatcccaaagcccggcagtccctgcagaacctggatgccttc
cctgtgctcagtgagggaaaggccagccatgtcaaaaaggagattcacttccagaaagcc
tgtggcccggacaatacgtgccagagtaacctgcacatgaaggcagagtttgccaatgaa
gagcagacaccttttcccagccatgatggtcaccagatcctccagtacagcgccagtgtc
aagaaggtcatgttggtcgtggacgtgaccaacttccagtcgccagggaaaccggcagag
gacgctcacaatgccatgctcaacgtcaccattcccccgtcactgatctactctgccttt
cgctcaaagctatggaacaacaacccagccatcaagtgttcagcagaggatatggttgta
ctgtgtgagctggggaacccattcaccagcaaccagatggatcaggtcctgatcatcttt
cagacgtctgagatcagcctggacaccagagagattcgctctacgctgcagctttccacg
ttgagtgaacagagcaatgtacaaccgctgcctcttgtcatggtggtggagtatacactg
gaggcgtcttttgcacttgcccagtacacagatcacactcacttcagtggggagatcatg
ggagaatcgggcatgaagactgccggcgatgtcggaagtcctgtggagttcacatttaag
gtgaatgttcttgggaagccgctgggtagccttggaaacctggaggtggagtttgattgg
ccctgggaggtagccaatggcaagtggctgctgtacctgacggagatccagaccaaaggg
acgtcagactctcactgtgtgcctcctggagccatcgtcaacccactcaaactcatgtta
ccagagagcaaagccagaaggagaaggaagcgagaggagggctccacagaggaggtgcac
cccagagaaccccaggcctccctcaatctgaagggaactcgcaaaaagtcctttaaactg
gactgtgtcacgggcactgctcactgtgtgaaattcatctgccctctccgcaacatgaac
aacactgcgacaatcattgtcagggccagagtgtggaacagcaccatgctggaggactac
agggaagcgtggcgggtgacagtgaatggtaaggccacactgaaactggtcacagacaaa
cccaccatcaggatgaacactgagagcacagagttcaccctgaatatagacccagagctg
ggggaggagtctacgtaccaggttcccctgtggatcatcatcgtgtctgcagtcgctggc
gtcctccttctggccttcatcatcctccttatgtggaagtgtggctttttcaagcggccc
aaccacttcaagatgatgccaatacaccagggagtgaagattggcaaagaggagcgctac
caggtaaatgagggattcctcatcgaggagccaaaccccaataaaagaaagaagcactgg
atcacaaactggactgaaatgcagcattactactga
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