Salvelinus sp. IW2-2015 (Arctic char): 112069876
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Entry
112069876 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112069876
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112069876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112069876
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
112069876
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112069876
Multi subunit type E3
ERAD complex
112069876
LMBR1L-GP78-UBAC2 complex
112069876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
RING_XB3-XBAT31
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
112069876
NCBI-ProteinID:
XP_023993027
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVVLLAGSIFSAYTTVTEQGFGVPDMDEPPPPAPLEGDNR
GGLGLEHVTSDDVVSADTELATTVMWYLVTDSLFVWVLVNTACCSLMLIAKMIQCMVFGP
LRVSEKQHLKDKFWNFIFYKFIFIFGVLNVQMVEEVVMWCLWFSALVFLHLMVQLCKDRF
EYLSFSPTTSMNSHVRVLTLLVSLLLGCCGLAVVCGLLGAAHGMHTLSFMAAECLLVTVR
TGHVIMRYTIHLWDLNHPGTWESKGSYVYYTDFIMELSMLSLDLMHHIHMLLFGNIWLSM
ASLVIFMQLRYLFHEVQRRIRRHKNYLRVINNMEARFAVATAEDLVANNDDCAICWDTMQ
TARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNISGDGGPARGQQQGAGLPLENNLXPG
GPAADARPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILAIAQQANNSQLNTMAHQI
QEMFPQVPYHLVLQDLQLTRSVEVTTDNILEGRIVVPFPALAAERSPVQVNPGPEGAGAS
GGVETAPSELNNLEVRGSRFSKSAEERQKMLLQRKDELLQQARRRYLRKSPEDEEDLPTL
EEDAPVSDMTMLRRRTMAAAAERRMQSQPDPAP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctattcctggagaggtttccctggcccagtctgcagacctacacagcgctg
agtgtggttctgctggctggaagcatcttcagcgcctacactactgtgactgaacagggg
tttggggttccagacatggacgagcctccaccacctgcacccttagaaggggataataga
ggcggcctaggcctagaacatgtgactagcgatgatgttgtgagtgcagatacagaattg
gcgaccactgttatgtggtacctggtcactgacagtctctttgtatgggtgttggtgaat
acagcttgctgttctctgatgttaattgctaagatgatccagtgcatggtttttgggccc
ctccgagtcagtgagaagcagcaccttaaggacaagttctggaacttcatcttctataag
ttcatctttatcttcggggtactgaacgttcagatggtggaggaggtggtcatgtggtgt
ctgtggttctctgccctggtcttcctccacctcatggtccagctgtgcaaggaccgcttt
gaatacctgtccttctcccccactacttctatgaacagccatgtgcgtgtccttacccta
ctggtgtccctgctgctgggctgctgtggtcttgctgtggtctgtggtctgctgggtgct
gcacatggcatgcacaccctctccttcatggctgccgagtgtctgctggtcactgtgcgg
actggacatgtcatcatgaggtacaccattcacctgtgggatctgaaccacccaggcacc
tgggagagtaagggctcctacgtctactacactgacttcatcatggagctgtctatgcta
tccctggaccttatgcaccacatccacatgctgctctttggtaatatctggctgtccatg
gccagtctggtgatcttcatgcagctgaggtatctgttccatgaggtgcagcgccgcatc
cgacgccacaagaactacctccgtgtcatcaacaacatggaggccaggtttgcagtggcc
acagccgaggayctggtagccaacaatgatgactgtgccatctgctgggacaccatgcag
acagcacgtaaactgccctgcggacacctcttccacaattcctgcctgcggtcgtggctg
gagcaggacacgtcgtgtccaacatgcaggatgtccctgaacatcagtggtgatggaggc
ccggccagaggccagcagcagggggctggcctcccactggagaacaacctgygccctggg
ggccccgctgcagacgccagaccacacctcaaccaacacaatcacttcttccactttgat
ggctcccgcatcgccagctggctgcctagtttctcagtagaggtgatgcacaccactaac
atcctggctatcgctcagcaggccaacaactctcagctcaacaccatggcccatcagatc
caggagatgtttcctcaggttccctaccacttggtgctgcaggacctgcagttgacccgc
tctgtggaggtcaccaccgacaacatcctggagggwcgcatcgtsgtgcccttccctgct
ctggcggctgagcgttcccccgtgcaggtgaacccaggcccagagggggcaggagccagt
gggggggtggagactgctcccagcgagctgaacaacctggaggtcagagggagccgcttc
tccaagtctgcagaggagagacagaagatgctgctgcagaggaaggatgagctgctgcaa
caggcacgcaggagatacttgagaaagagcccagaggacgaggaggacctgcccactctg
gaggaagacgcccctgtctcagacatgaccatgctgagacgcaggaccatggcagcagct
gcagagagacgcatgcagagccaaccagaccctgctccctga
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