Salvelinus sp. IW2-2015 (Arctic char): 112070345
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Entry
112070345 CDS
T05762
Symbol
cdhr3
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 3
KO
K16503
cadherin-related family member 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112070345 (cdhr3)
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Cadherin related
112070345 (cdhr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
112070345
NCBI-ProteinID:
XP_023993528
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MVSGSAPEVSLIGLPGTARLAENSKAGTVTYSFQVALSPGASLASGYPRILNSDPLTNTF
TVSMINTNKAQVTVTGTTNLDFETSPNSFVLQILAVDSTKDMALQRLTVILTDVNEPPVF
LDEESVLYVLEKSPPGQIYRPTVSDPENQPVTVWLPQPLSLSLFTLTPSNTEFRIDVGSG
FLTTTKQFNYLTDPRSYAFKLTVSDGNNSVSRTLVINIVNRNDDKPQFLNYVLSSTITDF
TVSEELSPGFIVTNITAVVPDDSFYIIYSIGTNNYLAIHRCEYNAQSYYTYLPYFHKISI
IDHNFFVNAHCAPLCFGLSHVSDTGLVTIAKRMDRDSAPLREDPVITVTVTATSSPSGPP
SNTITLTNTITLTITVTDINDNPPICSPDAQRSYFYTVVYLYFQYCIQQIETVRKGVFQE
RCGLDLNPCGHXYVHEGSSHYCYVSIASFPLTGSRVAVSETEKPGALITTVTCTDNDVET
AFREFLFTGLSCLGCANRFALEPTGSNQIVLKGNLDLEDPSNLLDGNEYSLLAVAQDKDE
PNLKGSAYIYVTVTPVNEFPPVFSSPSYFYRISELLGRGTVIGSVKATDRDLPATGVRYS
LISGGGTGGLSNIFSLDPKLGSLALLTRPDYETTQTYSLVIRAQDGDPISPLIATTTVTI
NITEANDEPPLCGPNQTHLIVPXDLRTGSNIQGFIVTCSDRDSPPASFIYSISGTAGLWA
SNPNNHFVFSPSSGTNVTRLFLKEPFDYESGLDRVWHYSLTVLVSDGNLRSAGXEPRGLT
QTGTVVINILVVDPDLTTVTTTTIPRVTYITITENTYSIDDWYIWFVIALGTMLLLGLLS
YLLYHLCGKLYKALKHSDCSCCKPRPREDKEIPEPTPPKREILMEVIKINTVFDGEEVDP
VTGRVYEYNSKSGARRWKDGTTVSEFVPMIQPESSSXVIPHGHSAQSQARSGRASTGQSK
MRSEGVGRATEDRRSPWSSQSRQTSGQSARSARFALSEGGVKLDMVPMTTRGRLNMSEA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaggctcggctccagaggtttcgttgataggcctgccaggcaccgctagactg
gcagagaacagcaaggctggcactgtgacctacagcttccaggtggctctgtccccaggt
gccagcttggcatcaggataccccaggatactcaactctgaccccctcaccaacacattc
acwgtgtccatgatcaacactaacaaagcacaggtaacagtaacaggtactaccaacctg
gattttgaracgtcacccaacagctttgtccttcaaatcctcgctgtggacagtacgaag
gacatggctcttcagagactcacagtgatcctaactgatgtcaacgaaccccctgtattc
ctagatgaagagtctgtcctgtatgttctggagaaatccccaccaggacagatctacagg
ccaacagtctctgatcctgagaaccagcctgtgactgtatggcttcctcaacctctctct
ctctctctctttacactgaccccgtcaaacacagagtttcgtattgacgttggctcaggc
ttcctgactacaactaaacagttcaactacctgactgaccccagaagctatgccttcaag
ctgacagtgagtgatgggaacaacagcgtatccagaacactggtcatcaacatcgtcaac
aggaacgatgataaacctcagttcctgaattatgtcctaagcagtacaatcacagacttc
acagtctctgaggagctgagtccagggtttatcgtgaccaacatcacagcagtggtaccc
gatgactccttctacatcatctacagcatcggcaccaacaactacctggctatacacaga
tgtgagtacaatgcccagtcatactatacatacttaccgtacttccacaaaatatcgata
attgaccataacttttttgtaaatgctcactgtgcgcccctgtgttttggcttgtcccat
gtctcagacactggcctggtgactatagccaaaaggatggaccgtgactcagctcctctc
agggaggaccccgtcataacggtcaccgtgacagccacctccagcccctctggtcctccc
tccaacaccatcactctgaccaacaccatcactctgaccatcaccgtcactgacattaac
gacaaccctcccatctgctccccagacgcacagaggtcatatttctatactgttgtttat
ctttatttccagtattgtatccaacagatagagacagttaggaaaggagtgtttcaggag
agatgtggcttggatttgaacccatgcggacactagtatgtgcacgaaggcagcagccat
tattgctatgtatccattgcatcgtttcctttgactggatccagggtggcagtatctgag
acggaaaagcctggggccctgatcaccacggtaacgtgtacagataatgacgttgagacg
gccttcagagagttcctgttcactggcctgtcctgtctgggctgcgctaaccgctttgct
ctggaaccmacgggatccaatcagatcgtactcaaaggraacctagaccttgaggatccc
agtaacctgcttgatggtaatgaatacagcctgttggctgtggctcaggataaggatgag
cccaacctaaaaggtagtgcatacatctatgtgacggtgacacctgtgaatgagtttccc
cctgtgtttagctctccatcgtatttctacagaatctctgagcttcttggacgtgggacg
gtgataggatcagtcaaagctacggacagagacctccctgccaccggcgtccgttactcc
ctgatctctggtggaggaactggtggtctgtctaacatcttctccctggaccccaagttg
gggagtctcgccctactgacccggccagactacgagaccacccagacctacagcctggtc
atcagagctcaggacggggaccccatcagtccgctcattgccaccactacggtcactatc
aacatcacagaggccaatgacgagcctccactgtgtggccccaaccagacacatctaata
gtccccarggacctgaggacgggctccaacatccagggcttcatcgtgacctgctcagac
agggactcccctccagcatccttcatctactctatctcaggtactgccggcctctgggcc
agcaacccgaacaatcattttgtgttctcaccttcctctggcaccaatgtcaccagactc
ttcctgaaggaaccctttgactatgagagtggcctggaccgggtctggcactacagcctg
actgtgctggtttctgatgggaacctgcggtctgcagggtytgagccaagaggtctgacc
cagactggcacagtcgtcatcaatatcctagtagtggaccctgacctcaccaccgtcacc
actacaactatacctcgtgtaacatacatcaccatcaccgagaacacctacagcattgac
gactggtatatatggtttgtcattgctctggggaccatgctactgctgggtttactgtca
tacctgctgtatcacctctgtgggaagctctacaaggctcttaaacacagtgactgctcc
tgctgcaaacccaggccccgggaagacaaggaaatcccagaaccaacacctccaaagagg
gaaatattaatggaagtgatcaagatcaacactgtatttgatggagaggaagttgatcct
gtgacagggagggtgtacgagtacaacagtaagtctggagccagacgctggaaggacggt
accactgtgtctgagtttgtccctatgatacagccagagagcagcagcayggtcattcct
catggtcattctgcccaatcacaggctaggagtgggagggctagcactggccaatcaaaa
atgaggagtgagggagtaggcagggccacagaggatagaagatctccctggtccagtcag
agcagacaaacgtctgggcagtctgcaaggtctgctcggttygctctttcagaaggaggc
gtaaagttagatatggtacccatgacaactaggggaaggctcaacatgtctgaagcctga
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