Salvelinus sp. IW2-2015 (Arctic char): 112070647
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Entry
112070647 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112070647
04121 Ubiquitin system [BR:
salp04121
]
112070647
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112070647
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112070647
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112070647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
HypA
C1_2
CATSPERG_NTD
zf-HC5HC2H
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
112070647
NCBI-ProteinID:
XP_023993848
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAEAAAAPQNRFFCHCCKGEIDPKLPEFTCPRCESDFIEEVTEDSSLLENSSTAEANDDA
GTLFSELWQLLFMERSALLLDPSTSESESDQSHLQAATVEEDVEGPSEVPVASMGGTDPL
VPEAERPSRPPSQGRRQSHTPAVEGLVEMTNYLSLILICLRCNIITFIHSLSISYLSWFC
PMPKGPGSIVAAVFGWSVLPTMETQAIAPAALSGMLHSNPGDYAWGQGGLDAVITELLGQ
FEGTGPPPAEKEMISSLPTVNVSQEQTDSRLECPVCREEYSMGESVKQLPCLHYFHSDCI
VPWLELHDTCPVCRKSLDGVDQSIQPPPEPPEPLSIRTDPQEERQAI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggcaccacaaaaccgttttttctgtcactgttgtaaaggtgaa
atcgaccctaaactcccggaattcacatgccccaggtgtgagtccgatttcattgaggag
gtgacagaagactccagtctcttggagaacagcagcactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacgctctgctcttctcttg
gatccctccacctctgagtctgagtctgaccaaagccatctacaggctgccacagtggag
gaagacgtagagggaccttctgaagtgcctgtggcctctatgggaggcacagatccttta
gtgcctgaagcggaacgcccctctcgtccgcctagccaggggaggcgacagtcccacacg
ccagcagtggaggggttagtggagatgaccaattacttatcactgatcttgatctgtcta
cggtgtaacattattacctttatccactcactctctattagctacctttcatggttttgc
cccatgccaaaaggtccaggcagtattgtggcagcagtttttggctggtctgttttgcca
acaatggaaactcaggctatcgcaccagctgcactgtctggcatgctccattcaaatcca
ggggactatgcctggggtcagggaggtctagacgcagttatcacagagttgttaggtcag
tttgagggcacaggaccacctcctgcagagaaggagatgatctcatccctccccacagtc
aacgtctctcaagaacagacagatagcagactggagtgtccagtatgtagggaggagtac
tccatgggagagtctgtcaaacagctgccctgcctccattatttccacagtgactgcata
gtgccatggcttgaactgcacgatacctgtcctgtgtgtcgtaaaagtcttgacggcgtc
gaccagagcatccagcccccaccagaacccccagagcccctctccatcaggacagaccct
caggaggagagacaggctatttga
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