KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112070702
Entry
112070702         CDS       T05762                                 
Name
(RefSeq) histone-binding protein RBBP4-like isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082  ATP-dependent chromatin remodeling
salp03083  Polycomb repressive complex
salp04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112070702
   03083 Polycomb repressive complex
    112070702
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    112070702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    112070702
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     112070702
  Histone modification proteins
   HAT complexes
    HATB complex
     112070702
   HDAC complexes
    Sin3A-HDAC complex
     112070702
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     112070702
    PRC2.2
     112070702
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     112070702
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112070702
  Chromatin remodeling factors
   NuRD complex
    112070702
   NuRF complex
    112070702
   NuRF complex (fruit fly)
    112070702
SSDB
Motif
Pfam: WD40_CDC20-Fz CAF1C_H4-bd WD40 WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 MIOS_WD40 Beta-prop_RIG_1st Beta-prop_DCAF4 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 112070702
NCBI-ProteinID: XP_023993913
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVNRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARHMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKVTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAAD
TEVQA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgataaagaagcagcgtttgatgatgctgtggaggagagggtgataaatgaggag
tacaagatatggaagaagaacacacccttcctctatgacctggtgatgacccacgccctg
gagtggcccagcctcactgcacagtggctgcctgatgtcaacagacctgaagggaaggat
ttcagcgtacacaggttggttcttggcacacacacctcagatgaacagaatcacctggtc
atcgccagcgtgcaactgcctaatgacgatgctcagtttgatgcctctcactacgacagt
gagaaaggtgagtttggaggctttggctcagtcagtggtaagatagagattgaaatcaag
atcaaccatgagggagaggtgaacagagcccgccacatgccccagaacccctgcatcatt
gccaccaaaaccccaaccagcgacgtgcttgtctttgactacaccaaacatccctccaaa
ccagatccatctggagagtgtaccccagatctgcgtttgaggggacaccagaaagagggc
tacggtctctcctggaaccccaacctgagtggctgcctcctcagcgcttctgatgaccat
actatctgtatgtgggatatcagtgccgttcctaaggagggaaaggttgtagacgcaaag
actatctttactggacacacagctgtagtggaggacgtctcctggcatctactgcatgag
tcactctttggatctgtagctgacgaccagaaactcatgatttgggacacgcgatccaac
aacacgtccaaacctagccatgctgtggacgcccacactgccgaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggcctcaggctcagcagacaaggtgactgtggct
ctttgggacctgaggaacctgaaactgaagctgcattcgtttgagtctcacaaagatgag
atcttccaggtccagtggtctcctcataatgaaaccatcctggcctccagtggcacagac
aggcgactcaacgtgtgggacctcagtaaaatcggagaggagcagtcgccagaggatgct
gaggatggtccacctgaactactgttcattcacggcggtcacacggctaagatctctgac
ttctcatggaaccccaacgaaccctgggtcatctgctctgtgtccgaggacaacatcatg
caagtttggcagatggctgagaacatctacaatgacgaggacccagagggagcagcagac
actgaggtccaggcatga

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