Salvelinus sp. IW2-2015 (Arctic char): 112070923
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Entry
112070923 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: UV excision repair protein RAD23 homolog A-like
KO
K10839
UV excision repair protein RAD23
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112070923
09124 Replication and repair
03420 Nucleotide excision repair
112070923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
salp03051
]
112070923
03400 DNA repair and recombination proteins [BR:
salp03400
]
112070923
Proteasome [BR:
salp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112070923
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112070923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
112070923
NCBI-ProteinID:
XP_023994145
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSAIAASTPSSEAPKSPVQDSGSSAGPAPAAIPIPSEEPTPTV
AEPPAPASSDPSVEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNPHR
AVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQVIQ
QNPSLLPALLQQLGRXNPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAALEEGAP
VNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgctaaaaacactgcaacagcagaccattcaaattgacatagaccctgat
caaacggtgaaggcactgaaggagaagatcgaagcagagaggggaaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacacctattaaa
gactacaaaattgacgagaagaatttcgttgtagttatggtatcgaaggcaaagtctgcc
atagctgcttcaacaccttcctcagaggcacccaagtcccctgtccaggactctgggtcg
tctgcgggcccggcccctgcagccatccctatcccctcagaggagcccacacctacagtc
gcagagcccccagctccagccagctctgaccccagtgtggaggtccaggggggagatgcc
tcctctgccttggtgacaggagcggagtatgagaccatgctgacagagataatgtctatg
ggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccccatcgg
gctgtggagtacctcctcactggcattcctagcagtccggtccaagagactaatccccca
gcacagcttcctgcatctgcccgcacaggcacagagacccctactgtagctgagggagaa
aaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccag
cagaacccctcactgctgccagctctactccaacagctgggccggnggaacccacagctc
ctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggg
gaggtaggagacgtgcctgaggtgggggacctgggtgctgcattggaggagggagctcca
gtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcgttg
ggtttccctgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaaccta
gcggccaacttcctcctgaaccagggctttgaggatgaatga
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