Salvelinus sp. IW2-2015 (Arctic char): 112070961
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Entry
112070961 CDS
T05762
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112070961
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
112070961
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112070961
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112070961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_COPA_B
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112070961
NCBI-ProteinID:
XP_023994188
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDXQIRVFNYNTLERAHMFDAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGANSVALGYDEGSIIIKLG
REEPAMSMDSNGKIMWAKHSEVQQANLKAMGEAEIQDGERLSLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGHDSSEYATRESTSMVKIFKNFKE
NKSFKPDFGAEGIHGGFLLGVRSVSGLAFYDWENTELVRRIEILPKHVIWELVCIATEES
FFVLRYLAEKVATAQETKESVSLSLPQPPFSGVGEIQEVVKTGLWVGDCFIYTTQSNRLN
YYVGGEIVTVAHLDKTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMRRDFG
MADRVLPTIPKEMRTRVAHFLEKQGFMQQALAVSTDSEHRFELALQLGELKIAYQLAVEA
ESEQKWKQLAELATTKCQFVLAQECLHHAQDYGGLLLLATASGNANMVGKLAEGAERDGK
TNVAFLTYFLQGKLDKCLELLIKTNRLPEAAFLARTYLPSHVSRVVKLWKESLGKESLGK
ESLGKVNQKAGDELANPTDNSNLFPGLQEAFLAEDYLKETHVRLRPAAEYPLITSNENRN
VLGESADYVPKVLPAKPEVAGSMDETPVLEAVVEAAAPEASVVEESIVMEZVEHVAAAVV
EFIPAVEESIPVTVVEPTMAAVEESIELAEEEPIIVEVEALKPKEATSVDDTITKIEALV
TIENDTEAPLLVPEVAQSAPEEEVIATPEEAVEEGPATMKPIATDAPVTESVTEPIVTEA
PVAEEAPVPIATEPEPVTIEAVVEAEAPIAAAVLEAIATEPMVTEQAPVTIEVAVAAEAP
ITEAVAEPIAATEKAPVIGRRE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccggttggacatcaagcggaagctgaccgctcggtcggaccgtgtgaagagt
gtggacctgcacccaactgaaccatggatggttgccagcctgtacaatggcagtgtctgt
gtctggaaccacgagacacagaccctggtgaagacatttgaggtgtgtgacctgcctgtg
agagtggctaagtttgtggcgaggaagcactgggtcattgctggagcagatgacawgcag
atccgtgtgtttaactacaacactctggagagagctcacatgtttgaygcccactctgac
tacatccgctgtatcgcagtccacccaacacaaccttacatccttaccagcagtgatgac
atgctgatcaagctttgggactgggacaagaagtgggtgtgtggtcaggtgtttgagggc
cacacccactatgtcatgcagattgtcatcaaccctaaagacaacaaccagttcgccagc
gcctccctggacaggaccattaaggtgtggcagctgggatcttccgcccctaacttcact
ctggagggccatgagaaaggagtcaactgtatcgactactacagcggaggggacaagccc
tatcttatatcaggagctgacgaccgcctggtcaagatctgggactaccagaataagaca
tgtgtgcagactctagagggccatacccagaatgtgtcctgtgtcagctttcaccctgag
ctgccaatcatcctcacaggctccgaggacggcacagtgagagtctggcattccagcacg
taccgcctggaaaacacactgaactacgggatggaacgtgtgtggtgtgtgtgtggccag
cgaggcgccaacagtgtggcgctgggatatgatgaaggcagcatcatcatcaagttgggc
cgtgaggaaccagccatgtctatggactctaacggtaagatcatgtgggccaagcactct
gaggtgcagcaggccaacctgaaggccatgggagaggctgagatacaggacggagagagg
ctgtccctggccgtcaaagacatgggcagctgtgaaatctatccccagaccatccagcac
aaccccaatggcaggtttgtggtggtgtgtggggatggagagtacatcatctacactgca
atggccctgaggaacaagagcttcggttcagcacaggagtttgtctggggccacgactcc
tcagagtatgctactcgggagagcaccagtatggtcaaaatcttcaagaacttcaaagaa
aataagtcttttaaaccagactttggggcagaaggtatccatggtgggttcttgctgggc
gtgaggtcagtgagtggtctggccttctacgattgggagaacacagaactggtccgccgc
attgagatcctgcctaaacacgtgatctgggagctggtgtgtatcgccacggaggagtct
ttctttgtgctgcgctacctggctgagaaagtggcaacagcacaggagaccaaggagtcg
gtctctctctcccttcctcaaccccctttctcaggtgttggtgagattcaggaggtggtg
aagacaggtctgtgggtgggagactgtttcatctacaccactcagtcaaacagactcaat
tactacgtaggaggagaaattgtcaccgtcgcccacctggacaaaactatgtacctgttg
ggctacatccctaaggatgaccgtctgtatctgggtgataaggagctgaacatcgtcact
tactctctgctggtgtcggtactggagtaccagactgctgtaatgaggagggactttggg
atggccgacagggtcctacccacaatccctaaagagatgaggaccagggttgcccacttt
ttagagaaacagggtttcatgcagcaggccctggctgtgtccacagactcagaacacagg
tttgagttggctctgcagctaggagaactyaagatcgcctaccagctggctgtagaggct
gagtcggagcagaagtggaagcagttggcagagctggccaccactaagtgccagtttgtc
ctggcccaggagtgtctgcaccatgcccaggactatggggggctactgctgttggccaca
gcctcgggcaacgccaacatggtgggcaagctggcagagggggcagagagagacggcaag
accaacgtggctttcctcacctacttcctccaggggaaactggacaaatgtctggagctc
ctcattaaaaccaaccggctgccagaggctgcattcctggccagaacatacctgcccagc
catgtgtctagagtggtgaagctgtggaaggagagcctggggaaggagagcctggggaag
gagagcctggggaaggtgaaccagaaggcaggtgatgagttggccaaccctacagacaac
agcaacctgttccccggcctacaggaggccttcctggccgaagactacctcaaggagacc
cacgtcaggctgaggcccgccgcagagtaccctctcatcacctccaatgagaataggaat
gtcctgggggaatctgcagactatgtgccaaaagtattgcctgctaaaccagaggttgct
gggagcatggatgaaacccctgtattggaagcagtggtggaggctgcagctccagaagct
tcagtagtggaagagtccattgtcatggaasaggtagaacatgttgcagctgcagtagtg
gagtttatcccagcagtagaagaatctatcccagtgacagtagtggaaccaactatggct
gcagtggaagaatccattgagctggcagaggaggaacccattattgttgaagtggaagct
ctcaagccaaaggaggcaacatcagtggatgataccatcactaagatagaggctcttgtc
accatagaaaatgacacagaagcacccctcttggtgccagaggtagcacagtccgcccca
gaggaagaagtcatagcaacgccagaggaggctgttgaggaaggacctgcaacaatgaag
cccatagcaacagatgcacctgttacagagtcggtcacagaacccattgtaacagaagca
ccagttgcagaggaagcgccagtgcctatagcaacagaaccagaacctgttaccatagaa
gcggtggtggaggctgaagcacccattgccgcagcagtactagaagccatagcaacagaa
cccatggttacagaacaagcacctgttaccatagaagtggcagtggccgcagaagcaccc
attactgaggcagtagcagaacccatagcagcaactgaaaaagccccagtcattggtaga
agagaatga
DBGET
integrated database retrieval system
