Salvelinus sp. IW2-2015 (Arctic char): 112071083
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Entry
112071083 CDS
T05762
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112071083
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112071083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
112071083
NCBI-ProteinID:
XP_023994317
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLATKRKRVDSDDQQDNQPVSKPAASSDS
ETSDSDDEWTAGGPKVKKKVKPGKPTATEKKKEAAKKRVHKAASSGSSGGDSSADSSAPE
EGEVSDSESNSSASSSDSSSEDDVFRDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIE
KREVLKRRFEIKKKLKTAKKKEKEEKKKKHEEEHRKRERSSSSHHEDRSHQDQQVVMSHN
KERRTKRDEKLDKKSQAMEELKAEREKKKTRTAKKQAKREPLKTSEVYSDEEEEEEEEDD
DKSSVKSDRSSHSSSYSEDEECGNEWIGTGSKAKPVYRVTTGCFVRIGIGNSSSKPVYRV
AEIVDVVETAKVYQLGTTRTNKGLQLRHGGDTRVFRLEFVSNQEFTENEFMKWKEAMIIA
SMQVPTLDEINKKEQAIKEACNYKFNDKDIEDIVKEKDRFRKAPSNYAMKKTSLLKDKAM
AEESGEGDRAKEIQDQLNELEERAEHLDRQRTKNISACPSVFSSYINQRNRSWNIVESEK
ALVAEGQNAKLQMDPFTRRQCKPTMVSNARDPSSPCSYPPTPQREVRRRVGKEMDLEFEM
GRERSHSRSASRGTYTDNNRCVRLMLFLRCVSEAKSLSVSANTLAVKDGAPRRSLNLEDY
KKRRGLI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgtaaagaaacggaaaggtcgagtcgttatcgactctgactctgaagacagc
gctagtgatgataatttagatcaggagctcctgtctctggccaccaagaggaagagggtg
gactcggatgaccagcaggacaaccagccggtcagcaagcccgcagcctcatcagactca
gagacatcagacagtgatgatgagtggaccgccggtggtcctaaagtcaagaagaaggtc
aagccagggaaaccgacggcaacagagaagaagaaagaggcagcgaagaagagggttcat
aaagctgcttcgtccgggagttctggtggagacagttctgctgacagttctgcccctgag
gagggtgaggtgtctgactcagagagcaacagctctgcctccagctcagactcctcgtcg
gaggacgatgtgttcagggacggctacggagaggacctgatgggagacgaggaggacagg
gctcggctggagcagatgactgagaaggagagggagcaggagctcttcaacaggatagag
aagagggaggtgctcaagaggagatttgaaattaaaaagaagctgaaaacagcgaagaag
aaggagaaagaggagaagaaaaagaaacacgaagaagaacacaggaagcgtgagagatca
tccagcagccatcatgaggacagaagtcatcaggaccagcaagtggttatgtctcacaac
aaggagaggagaactaaacgggatgagaaactagataaaaagtctcaggccatggaggaa
ctgaaagcagagagagagaagaagaaaaccaggacagcaaagaaacaggcgaaacgggag
cccctgaaaaccagcgaggtttactcggacgaagaggaggaggaagaggaggaggaygac
gacaaatcatctgtaaagagcgatcgcagttcacactcttcatcttattccgaagacgag
gagtgtggaaatgaatggattggaacaggtagtaaagcaaaaccagtttacagggtaacg
acaggctgcttcgtacggataggcatcgggaacagtagtagcaaaccagtttacagggtg
gctgaaatagttgacgtggtagagacggctaaggtgtaccagttgggaacgacccggacg
aacaagggactacagttacggcatggtggtgacacccgagtcttcagactggagtttgtg
tccaatcaggagttcacagaaaacgagttcatgaagtggaaagaggcgatgatcatagcc
agtatgcaggttcccactctagatgagatcaataagaaggagcaagccatcaaagaggct
tgtaactacaaattcaacgacaaagacatagaggacatcgtaaaagagaaagaccgattc
cgaaaggcgccttccaactacgccatgaagaaaacatcactactcaaagataaggccatg
gctgaggagagtggagaaggagaccgagccaaagagatccaggaccagctgaatgagttg
gaggagagggccgagcatctggacagacagaggaccaaaaacatctctgcctgtccatct
gttttctccagctacatcaaccagaggaatcggagttggaacattgttgagtctgagaaa
gccctagtggctgagggacagaatgccaagctgcagatggacccgtttactagacggcaa
tgcaaaccaaccatggtgtctaacgccagagacccttcaagtccatgcagctatcctcca
acacctcaacgagaagtacggagaagggtcggcaaagagatggacttggagtttgagatg
ggaagggagcggtctcactcaaggtcggcgtctaggggcacctacaccgataacaacaga
tgtgtcagactaatgttgttcctccggtgtgtttcagaagccaagtctctgtcagtgagc
gccaacaccctggcagtgaaggacggcgctccacgtaggtctctcaacctggaggactac
aagaagaggaggggcttgatctaa
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