Salvelinus sp. IW2-2015 (Arctic char): 112071409
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Entry
112071409 CDS
T05762
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112071409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112071409
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112071409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Tox-ODYAM1
JAKMIP_CC3
PBC
Motif
Other DBs
NCBI-GeneID:
112071409
NCBI-ProteinID:
XP_023994629
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSGFNFGSGAIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
ASLFSQKPTGGFSFNTPPSGAAAPTQGLTLGAPAASTAPTTGFSMTFNKPSASAQPFSLT
AASSAPTGAGLTLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTG
LSQSTLGGLGFALGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKSDK
SSGASPQDSKALKDENLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSL
KQLLSVSASGLQRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLV
EQFEVQLQQYRQQIEELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENV
KTLKQQYLGYRRAFLEDSTDVFESKRVASKKWQSAPRITTGPAPFSSVPNAAAVAMAATL
SQQQQPGPGSQASLGSGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSAT
KPSGGSLSAGFGSNSSSGFNFSNPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGN
KRGKR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccggggctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggt
gcatcactattctcacaaaaacctactggggggttctcctttaacactcctccctcagga
gctgctgcacccacccaaggccttacattaggtgccccagcagcctctacagcccctacc
acgggcttcagtatgaccttcaataaaccctctgcctcggcccaacccttctccctcact
gcagcctcctcggcccccacaggggcaggactgacactaggctccgtcctcacctccact
gcgccacagcaaggagccacaggattctctctcaacctagggggtgtggccgcaagtaca
gccccatccacgggtctatcgctgggttccagtatgttctctaacatggctactactggt
ctgagtcagtccactcttggaggactggggtttgcgttaggtttgggccagaccactctc
ggatcaggggggttgacyttaggttccctggcctctacctccacggcggtgtcagcggcc
cccagccttggactgggcggagttgacttcagcacctcctcagagaagaaaagcgacaaa
tcatcaggggccagcccacaagacagtaaagctttgaaagatgaaaatttgcctccagtc
atctgtcaggatgtagacaacttccagaagtttgtgaaggagcagaagcaggttcacgag
gagatcagcaggatgtcatctaaagccatgctgaaggttcaggatgacatcaagagtctc
aaacagctgctgtctgtcagcgcttcgggactacagagaaacgccctggctatagacaaa
ctgaagatggagactgcgcaggagttgaagaatgcagacatagctctgcggactcagaag
actccccctggactccaacacgacaacacagctccctatgattatttccggtgtttagtg
gaacagtttgaggtccagttgcagcagtacagacagcagatagaggagctggagaatcac
ctcactacacagggcagtggatcacacatcacaccacaggatctgtcactggccatgcag
aagttgtaccagacgtttgtggctctggctgctcagctccagtcagtacacgagaacgtc
aagaccctgaagcagcagtacctgggataccgccgggccttcctggaggactccacagac
gtcttcgagtccaagcgggtggccagtaagaagtggcagagtgccccacgcatcaccact
ggccctgcccccttcagcagcgtccccaatgcggcggcggtcgccatggcagccacgctg
agccagcagcagcagcccggcccagggagccaggcgtccctggggtctggtttgggaaac
ccctttgccttgggagtgggctctagcttgggcacctcaggcctcggagtgtttggtggg
ggtccaggtttcgggggggtagcgacggggggctcctcatttggtttctcctcrgccacc
aagccctcgggagggagcctgagtgcaggttttggaagcaacagcagttcagggtttaac
ttcagtaaccccggcctcaacgcgtctgcaggcctgacgtttggcgtgtccaaccctccc
gccacgggcttcggcactggaggtccactgctgcagctcaagaagcccccggtgggaaac
aagaggggcaagagatag
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