KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112071449
Entry
112071449         CDS       T05762                                 
Symbol
trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:salp01009]
    112071449 (trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    112071449 (trim42)
Protein phosphatases and associated proteins [BR:salp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112071449 (trim42)
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    112071449 (trim42)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX fn3 ANCHR-like_BBOX zf-C3HC4_4 zf-C3HC4
Other DBs
NCBI-GeneID: 112071449
NCBI-ProteinID: XP_023994680
LinkDB
Position
Unknown
AA seq 609 aa
MPGTGSESGCWPRLRSSKKRSNPKAKQTGKEIGAQDAQTKAELDPMTRSLALHLCCPACD
TLLLQPVSLPCGHCLCQPCLEGIRKKPSSTKASDAQQAQPYSQCPCCLVHYSLQPGGAWP
FPENLLLANVSEQLLERLEGLKRVKQPKNTRVKDTSMRVTXCEICSKQCEAQHYCRTCGL
NYCAKCLRKLHGNRAFQAHVLTEPVERGCRDPCPIHHDRSLSHCCLDDGALGCQGCMEQG
HQGHDVSPVHEARARREVGIRNSLEQAEKVKSQCEADMVSMDQLRARTGSDGAELRRRVR
EGFLSLRNVLLDQEAALLSHLDNLTSSTRSGARDFLQTSAPLLGSLTGLEVISEQALLEP
DTVAFLTGVVALTQWLQRVNGDIHRPDLTLQEGEPFKGVKMDFDALLKDLQGLLGTHLHW
KSPEVDAVVAATTSVESDVLEGCCEVLQVPSCPGTPHRTLALADSPLSPRNPKSPRKLVM
EEHLGLSAGDCSDKEHNLLPRPPIIYQHIVSGDTVEIFWMLPMGEEVETFDIHFQDAVIV
GMAMEERKGVVLVGLKTCNLQTAGLRLGTHYLFRARSVNSHGAGEWSSSYRVNSERQGDE
AKAAVTQEI
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcctggtactggttctgaatctggctgttggccacgcttgagatcttcaaagaagcgc
tccaaccccaaagccaaacagacaggaaaggagataggcgcacaggatgcccagaccaaa
gctgagctagacccgatgacccgctccctggctctccacctgtgctgcccagcctgtgac
actctcctcctccagcctgtgtctctgccctgtggccactgcctctgccagccctgcctg
gaaggcatccgcaagaagccctccagcaccaaggcctctgatgcccaacaggcccagccc
tactcccagtgcccctgttgcctggtccactactccctccagcctggcggggcctggccc
ttcccagaraaccttcttctggccaacgtatctgagcagctcctagagaggctggagggc
ctgaagcgggtgaagcaacccaaaaacacccgggtcaaggacacatccatgagggtgacc
gyctgcgagatctgctctaagcagtgcgaggcccagcactactgccgcacctgcggcctc
aactactgtgccaagtgcctgagaaaactccatggcaaccgggcattccaggcgcacgtg
ctgacggagcccgtggagcgtgggtgccgcgatccatgccccatccaccacgaccgttcc
ctgtcccactgttgccttgacgacggagctctggggtgccaggggtgcatggaacagggg
caccaggggcatgacgtgtcacccgtccacgaggcccgcgcccgcagggaggtgggcatc
cgcaattcgctggagcaggctgagaaggtgaagtcccagtgtgaagccgacatggtgtcc
atggatcagttgagggccagaacgggctccgacggcgccgagctgagacgccgcgtgcgc
gagggcttcctgtctctccgtaatgtcctgctagaccaggaggcggcactgctctcccac
ctggacaacctgacctccagtacccgcagcggtgccagggacttcctccagacctctgcc
ccactcctgggctccctgactgggctggaggtgatctctgagcaggccctcctggagccc
gacaccgtggccttcctgaccggggtcgtggctctgacccagtggctacagagggtcaac
ggggacatccaccgccctgacctgactctccaggagggggagcccttcaagggggtgaag
atggactttgacgccctccttaaagacctgcagggcctgctggggacccacctccactgg
aagagccctgaagtggatgcagtggttgcagcgacgaccagcgtggagtcagacgttttg
gaggggtgctgcgaggtgttgcaggtgccatcctgcccagggaccccccaccgcaccctg
gccctggcggactcccccctgagcccccggaaccccaagagccccaggaagctggtgatg
gaggaacacctgggcctgtcggctggggactgcagcgataaggagcacaacctgctgccc
aggccccccatcatctaccagcacattgtcagcggagacactgtagagatcttctggatg
ctgcccatgggcgaggaggtggagacctttgacatccacttccaggatgctgttattgtg
gggatggccatggaggagaggaagggagtggtcctggtggggctgaagacctgcaacctg
cagacggccgggctccgcctaggcacacactacctgttccgggcacgctctgtcaacagc
cacggggccggggagtggagctcctcctacagggtgaattccgagcgccagggagacgag
gccaaggcagccgtgacacaggaaatctaa

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