Salvelinus sp. IW2-2015 (Arctic char): 112071636
Help
Entry
112071636 CDS
T05762
Symbol
apex1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112071636 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
112071636 (apex1)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112071636 (apex1)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112071636 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112071636
NCBI-ProteinID:
XP_023994832
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MFLKTHCFVLEETAECDTVESFVVKKQTAARVYLCVRVVCLRGVCGIRTSASMSKRSKKN
EQEAGDGDHDNGTASAAKKGKKVKEPEAPILYSDPPDKMNSKDGRAANMKITSWNVDGLR
AWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAGSDEKEGYSGVAM
LCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYRKTWDVEFK
AYLSDLDKRKPRGDLNVAHEEIDLKTPKATKKTQAHSRGAXGFNQLLCCRLTDSFRELYP
EQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMGSDHCPITLXMVV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaaaacccactgctttgttttggaggagactgccgagtgtgacacggttgaa
tcctttgttgtgaaaaagcaaacggcggcgcgtgtgtacttgtgtgtgcgtgttgtgtgt
cttcggggcgtgtgtgggataagaacgagtgcaagtatgtcgaaaagatcgaagaaaaat
gagcaggaggctggagatggtgaccatgacaacggcacagcttccgctgccaagaaagga
aagaaggtcaaggaaccagaggcccccattctgtacagtgaccctcctgataagatgaac
agcaaagatggtcgtgctgctaacatgaagatcacctcctggaatgtggatgggctcaga
gcttgggtcaagaagaagggccttgattgggtgcgtgacgaggccccagatgtgctgtgc
ctacaggagacgaagtgcgctgagaagtcccttcctgatgaaatcacctccatgcccgag
ttcccccacaagtactgggctggctctgatgagaaggagggctatagcggggtagctatg
ctgtgcaagactgagcccctcaaagttacctatggcattggtaaagaggagcatgataag
gagggccgtgttatcactgctgagttccccaccttcttcctggtcaccgcctacgtgccc
aactctggccgaggcctggtgcgcctggactatcgcaagacctgggatgtggagttcaag
gcctacctgagcgacctggacaagcgcaagccccgtggggatctgaacgtggcccatgag
gagatcgacctgaagactccaaaggcaacaaaaaaaacgcaggctcacagcagaggagcg
tgaggcttcaatcagctgctgtgctgcaggctcactgacagcttccgcgagctgtacccc
gagcaggccaacgcgtacaccttctggacctacatgatgaactctcggtctaagaatgta
ggctggcgtctggactactttgtgttgtcctctgctctactgccaggcctttgtgatagc
aagatccgcaaccaagctatgggcagtgaccactgccccatcactctacasatggttgtg
tag
DBGET
integrated database retrieval system
