Salvelinus sp. IW2-2015 (Arctic char): 112071890
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Entry
112071890 CDS
T05762
Symbol
vti1b
Name
(RefSeq) LOW QUALITY PROTEIN: vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112071890 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112071890 (vti1b)
Membrane trafficking [BR:
salp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
112071890 (vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
112071890
NCBI-ProteinID:
XP_023995086
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MSSEEFEKLQEIFKSXYDELKLMPDRLLKCQGEEKKRLVRTFDERHGEALEVLQGMEQEL
VGVPSSYRNTMSTKLRLYRRDLGKLQREVKSSDLSSTSSTRPAEGAYGIYSSQNEHSTQL
QSQRVLLLQGHEHLNNASQSIERSQRIAAETDQIGVDIIEELGEQREQLDRTRDRLVNTG
ENLSRTRKILRAMSRRLMTNKLLLSVIILMELVILGAVVYLKFFRK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaagagtttgaaaagctgcaggagatcttcaaatccrtgtatgacgaactg
aagttgatgcccgacagattactgaaatgtcaaggagaggagaagaagaggttggtgcga
acttttgacgaaagacatggagaagcactggaagtgctgcaagggatggagcaggagttg
gtcggagtcccctcgtcctaccgcaacaccatgtccaccaagctgcgtctgtaccgcaga
gacctggggaagctccagagagaggtgaagagctctgatctgtcctccacctcctctacc
cggccagcagagggcgcctacggcatctactcctctcagaacgaacacagcacccagctt
cagtctcagagggtcttgctgctccagggacacgagcacctgaacaacgccagtcagagt
atagagaggagtcagcgcatcgccgcagagacagaccagatcggcgtggacatcatcgag
gagctgggagagcagagagaacagctggaccgcaccagagaccgactggtcaacaccggg
gagaacctcagccggaccaggaagatcctacgagccatgtctcgacgactgatgaccaac
aagctgttgttatccgtcatcattctgatggagctggtcattctgggtgcagtcgtctac
ctcaagtttttccgcaagtag
DBGET
integrated database retrieval system
