Salvelinus sp. IW2-2015 (Arctic char): 112071940
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Entry
112071940 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112071940
04121 Ubiquitin system [BR:
salp04121
]
112071940
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112071940
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112071940
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112071940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
Zn_ribbon_19
zf-rbx1
zf-Nse
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
112071940
NCBI-ProteinID:
XP_023995120
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MAEAAAVXPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGANGTDDTAT
QFAELWHLLFVERPFTVDGDSPDSEPRVPGGGVGVGAGGLGLGGLGGLGGLGGGPIGGSV
PAGLGGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFAN
SGVPGQPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTVN
VSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCXVCEKGLNGKT
ATPRTPQIPLSKHGPRTQERWSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttnccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcgctaacgggacagatgacacagccaca
cagtttgcagagctgtggcacctgttgtttgtagagaggcctttcacagtggatggtgac
agtccagactcagagccccgggtccctggtggaggggttggggtaggagcaggggggtta
ggtctgggggggctgggagggctaggaggcctgggaggaggtcctatcggagggtcagtt
cctgctgggttaggaggacccctggggggtcctctgggagggggggaacactgggggccc
ggtcgcccccctcgcctgcacagtcagcggaggtaccgctccagagggagcagcagacct
gaccgctcgcctgccgtagaggggatagtacaacagtttctggctggtctatttgccaac
tctggagttcctggccaacctcccctctcttggacggggatgctacactctaacccaggg
gactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcagttt
gagaacacgggccctcctcctgcagagaaagagaagatctcctccattcctacagtcaac
gtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggaggactttgca
gtgggagagcccgtcagacagctaccctgcaaccacttcttccactcagactgtatagta
ccctggctggaaatgcacgatacgtgtnctgtgtgtgagaaggggttgaatgggaagaca
gcaacacccagaaccccccaaatccccctctctaaacacggaccccgcacacaggagaga
tggtccttctga
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integrated database retrieval system
