Salvelinus sp. IW2-2015 (Arctic char): 112072830
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Entry
112072830 CDS
T05762
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112072830 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112072830 (exosc8)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112072830 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112072830
NCBI-ProteinID:
XP_023995996
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHLRFLKENCRSDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELANPPVDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVIQ
KEDLCILKGKLCWVLYCDIMCLDYDGNLLDACLIALLAALKNARLPEVTVNKETEAPEVN
LEKRTSLNIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLHDCISRATTRHKEVRKLIDKVIQSAETPK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgctgagcccttggaatatcacctgaggtttctgaaagag
aactgccgttctgatggaagggagctgggtgaattcagaaccacgacattgaatataggt
tctatatccacagcagacggctcagccctggtgaagattggaaacaccacagtcatgtgt
ggcatcaaaggggaactggcaaacccaccagtggatgcacccaataaaggttacatwgta
cccaatgtagacctgcctcctctgtgttcgtcacggttccgtcctggaccacccggggaa
caggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtcatccag
aaagaggacttatgcattctgaaaggaaagctgtgttgggtgctgtactgtgacatcatg
tgtctggactacgacggtaacttgttggacgcctgtctcatcgccctgctggctgctctt
aagaacgcgcgtctcccagaggtgacagtcaacaaagagacagaggctcctgaggtgaac
ctggagaaaaggacaagtctgaacatccacaaacaccccgtcggggcctctttcattgtg
tttgacgactctataatgattgtcgaccccaccgctgaggaagagagcctgtctacagcc
acaatcacagtggtaacagacgaggaagagcgactctgcgccctccacaagccaggtggt
acatcattatcaggtgagaagcttcaygattgtatcagcagagccacgacgagacacaag
gaggtccgcaaactcatcgacaaagtcatacagagcgccgagacaccgaaataa
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