Salvelinus sp. IW2-2015 (Arctic char): 112072901
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Entry
112072901 CDS
T05762
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
112072901
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112072901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112072901
NCBI-ProteinID:
XP_023996049
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MYSMMMETDLHSPVPQTNTNSGHTGGSNNGNKVNQDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLTGTGGGGVGLGMSPGVGQRLDSPGGHGGASAASYAHMNGWANGAYSGQVAA
AAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHPHNPQPMHRYDMSALQYSPISNSQSYMSA
SPSGYGGITYTQHQSSGVASSGSMGTLGSLVKSEXSVSPPVSTHSRAPCPGDLRDMISMY
LPTGEAAGDPSVQSRLHALPQHYQSSTTGYLKKRTTLW
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatgatggagactgacctacactccccagtgccccaaacgaacacgaat
tcggggcacacgggaggatcaaacaatgggaacaaagtcaaccaagaccgcgtaaagaga
ccgatgaatgccttcatggtttggtcccggggccagcggcgaaagatggctcaggagaac
cccaaaatgcacaactccgagatcagcaagcggctcggcgcggagtggaaggtgatgtcc
gaggcggagaagagacccttcatcgacgaggcgaagcggctacgagctatgcacatgaag
gagcatccggattataaatatagaccgagacggaagaccaagacactgttaaaaaaggac
aaatactctttggccggtgggctgctcaccgggacagggggtgggggtgtcggtctaggg
atgagccctggggtcggccagaggttagacagtcccgggggtcacggtggtgcgtctgct
gccagctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcaggtggctgca
gctgckgcggccgcggccatgatgcaggaggctcagctcgcctacagccagcacccgggc
agcgggcaccaccaccactcacaccaccaycacccgcacaacccccagcccatgcaccgc
tacgacatgtcggccctccagtacagccccatctcgaactctcaaagctacatgagcgcc
tctccgtccggctacggcgggatcacctacacgcagcaccagagctctggtgtcgcctcg
tccgggtcgatgggcacgctgggctctctggtgaaatcggaacmgagtgtgagccctccc
gtctctactcactcgcgcgccccgtgtcccggggacttgagggacatgataagcatgtat
ttaccgacgggggaagctgcaggtgacccgtccgttcaaagtagacttcacgcgctgccg
cagcactaccagagctccacgacagggtacctaaagaaaaggacgacgttgtggtag
DBGET
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