Salvelinus sp. IW2-2015 (Arctic char): 112073765
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Entry
112073765 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112073765
04121 Ubiquitin system [BR:
salp04121
]
112073765
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112073765
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112073765
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112073765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Filamin
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
DUF7830
zf-RING_2
Ig_GEX2_N
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
112073765
NCBI-ProteinID:
XP_023996764
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MASFSDSDLQTCPLCKELCGSSSAPISCNSSTSSSSSHSSSSSSRRLHVLPCLHAFCRQC
LEGQRSHGDPLKLSCPTCNQKVSISEAGVDSLPSSNFLLSNLLDVEQLQLGQNKNGHRGV
SGCSIPRFHRAHSGLRPSRLGGPQCSSCDEGNPASFHCLDCQEYLCDNCVRAHQRVRLTK
DHFIERLAESLQHASRGKASPIAGGGRGVGLSLTQPFQSNSSLLPLFQDRMSFCQHHDNK
VFLFFCETCSVPICRECSVGRHMGHSLVYLQDAVQDSRDIIIQLLADAQQGRQAVQLSME
KVQAIAEQVDIKAKVVQTEVKNMVLRLLKALEDRESQLLWKVEKIHQLKAKSLYLQVEKL
HQNLTKLDSTIAAVTQVLDEGCHLDVLLARERTLTQIQELKSLRGLLQPQEDDRLMFTPP
DQALYKAIQSMGLISSGAFAPVTKAHGEGLKTALRGKTASFTVIGYDHDREPCLSGGDAV
SAVVMAAADGNLSAAEVCDNQNGSYTVSYLPKTEGEDLVSVLVCNQHIMGSPFKVLVKSG
RRYGALGSPVSAFGSEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKPCGAFHHKF
GSLGSRPGQFDRPAGVACDSQQQIIVTDKDNHRVQVFTFDGQFMLKFGEKGTKNGQFNYP
WDVAVNSAGKILVSDTRNHRIQLFGPDGSFINKYGFEGALWKHFDSPRGVAFNHEDHLVV
TDFNNHRLLVIRPDCQSARFLGSEGTGNGKFLRPQGIAVDQENRIIVADSRNHRVQVFEP
NGNFLCKFGTHGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattctcagactctgacctgcagacctgtcctctctgcaaggagctctgtggc
tcctcctccgctcccatctcttgtaactcctccacttcctcctcctcctctcactcgtcc
tcctcctcctcccggcgcctccatgtcctcccctgcctgcatgccttctgcaggcagtgt
ctagagggccagcgcagtcatggggaccctctcaaactcagctgccccacctgcaaccag
aaggtctccatctctgaggccggagtggactctctcccttcctccaacttcctcttgagt
aaccttctggacgtggagcagctccaactcggccaaaataagaacggtcaccggggggtc
agcgggtgctccataccccggttccaccgcgcccatagcgggctccgcccgagccgtctg
ggagggccccagtgcagctcctgtgacgaggggaacccggccagcttccactgcctggac
tgccaggagtacctttgtgataactgcgtccgagcccatcagagggtccggttgaccaag
gaccacttcatcgagaggctggcagagagcctgcagcatgcaagccgaggcaaggccagc
cccatcgcaggtggaggaaggggtgtagggttgtccctgacccagcccttccagtccaac
tcctccctgctgcctttgttccaggataggatgagtttctgtcagcaccatgacaacaag
gtgtttctgtttttctgtgagacgtgctctgtgcctatctgtagggagtgtagtgtgggc
agacacatgggccacagcttggtctatctacaggacgctgtccaggactccagagacatc
atcatccagctactggccgacgcacagcaaggaagacaggctgtacagttgagtatggag
aaggtccaggccatagcagagcaggtagacatcaaggccaaggtggttcagacagaggtg
aagaacatggtcctcagactcctgaaagccttggaggacagagagagtcagctactctgg
aaggttgagaagatccaccagctgaaagccaagtccctgtacctgcaggtagagaagctg
catcagaacctgaccaagctggacagcaccatcgcagccgtcactcaggtgctggatgag
ggttgtcacctggacgtgctgctggccagagaacgcacgctgacccagattcaggagctc
aagtctctcagaggcctgctgcagccacaggaggacgatcgtttaatgttcacccctcca
gaccaggccctgtacaaagccattcagtccatggggttgatcagtagcggagcatttgct
cccgtcaccaaagctcacggcgagggcctaaagaccgcactccgtggcaagaccgcctcc
ttcaccgtaattggctacgaccacgacagggagccctgcctctcgggcggtgacgcagtg
tccgcggtggtgatggcagcggcggatggtaacctatcggctgcggaggtgtgtgacaac
cagaacgggtcgtacaccgtcagctacttgcccaagactgagggagaagatttggtgtca
gttctggtctgtaaccagcacatcatgggcagccccttcaaggtactggtgaagtctggg
cgacgctatggggctctgggttcaccggtgtctgcgtttggcagtgagggggagggtgat
ggtcagctgtgtcgtccctggggaatcagtgtggataaagagggatacgtggtggtggcc
gaccgcagtaacaaccgcgtacagatcttcaagccgtgcggtgccttccaccacaagttt
ggctccctgggctctcgccccggtcagtttgatcgtccagcgggtgtggcgtgcgacagc
caacagcagatcatcgtaacggacaaagacaaccaccgtgtgcaggtgttcacctttgac
ggacagtttatgctcaagttcggcgagaaaggcactaagaacggtcagttcaactacccc
tgggatgtggcagtgaactctgcggggaagatcttggtctctgacaccaggaaccaccgc
atccagctctttggccctgatggctcgttcatcaacaagtacggctttgagggcgccctg
tggaaacactttgactcgccgcgtggcgtcgcctttaaccatgaggaccacctggtcgtc
accgacttcaacaaccaccgtctgctggtgattcggccagattgccagtctgcccggttc
ctgggctctgagggtaccggtaacgggaagttcctgcgtccccagggcatagcggtggac
caggagaaccggatcatcgttgccgactcgaggaaccaccgggtgcaggtgttcgagccc
aacgggaacttcttatgcaaatttggcacccatggcagtggcttcggacagatggaccgc
ccctccggtgttgctgtgacacctgacggagtcatcgtggtcgtcgacttcggaaacaac
cgcatcctcaagttctaa
DBGET
integrated database retrieval system
