Salvelinus sp. IW2-2015 (Arctic char): 112073958
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Entry
112073958 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112073958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112073958
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112073958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
RGS
Motif
Other DBs
NCBI-GeneID:
112073958
NCBI-ProteinID:
XP_023996960
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
WQTGKTQIIGPEEEEDDSYALNEMDXPFQDIELLKSRPAHMMVFMRYVFSQLLDPNSLLF
YLSVEAYLGSSPKDARALAPQICSHFLDPDALLKIRVREEYLTDIESRLHAQEDIRGPLS
ELQQQVLPDIQDQIQDYRNKQMMGLGXLFGEGDLQQLDGDPAKEKQVVDRQVTALWEILS
KHEDDRSSPLASVVLLYLRHSGIKLRDSRVFPGLSTEKEKWLAFFPKTKKLNSAKKDKDG
EDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHPEIPGEEGDEGDL
HRLSSSSLGEDSMDSPMVSVRLARSESLKAQGEGRRRGGASGVETVPRSRSDVDMEDCGE
EIEGPGLTPLHHSASSSATSSSARSLENPTPPCTPRSSRRQFEESPVALLPDAPALEDDV
VDSHNWQETVAPQVLATLCPREVDRQAIIYELLTTEASHLRTLRVLDQVFFQKMRCVLSS
DELACIFPNLPQVYQLHVSLCEAMKKKRESPIVQGIGDIMLARFEGVAGEEFQEQASHLC
SQQSQALELIKNKQRKDPRFTHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNII
KHTEGTXDPDLPPLQRAQACCRGILQAVNEXVRETEHRNXLNQYQRRLDPTPQFKSLDLT
SKTMIHEGPLTWKVNKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRWLGGGGSGDTK
ASFSPVVQLDSLLVRSVATDNKALYIISTTERKIYELVAGTSSEKNTWKDQLEKTISLVA
GSSPSTNNRSTPVFSPNLGNASPVSTGSHVYQSDDSMTEQVVLMETDSPNDEDNELARTT
PTDQSGAFLCGEGRDYVKRRIGVAEAALEDVETLRQLIFRDLEEDGWSHGSDGTPTNEAA
NERSPFNDQQRPTSSETLLSVSSSQWEAEHAEAPPSEVESPSVHVVRKAVVAGSPSIPVD
ITEDVTLHSDQSPEPRGEASVRGNVFYLVMPTEQGEGLLDESHTDEVNDPPTTTELPDLE
QEVISSPVQTHEKEGQVASIMSAGNQSERGNLSLQEGQSQSRKSLQSHIIKNVDYIFHTI
EELMRKLHQLRDIETAHHQLLKTLREPPVNPESGDLFCIQATVVRTPFLDRDPGDGKEAS
PAEPAKLKILSTGF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
tggcagactgggaagactcagatcattggccccgaggaggaagaggatgacagctatgca
ctcaatgagatggacgktccatttcaggacatagagcttctcaagtcgcgaccggcccat
atgatggtgttcatgagatatgtcttcagccagctactggatcccaactcactgctgttc
tacctgtcggtggaggcctacctgggctccagccctaaagacgcccgtgccctcgcgcct
cagatctgctcccacttcctggaccctgacgctctgttaaaaatcagagtacgagaagag
tacctgactgatatagagagtcgtctccatgcccaggaggacatcaggggacctctgtct
gagctccaacagcaggtgctgcctgacattcaggaccaaatacaggactacaggaacaag
cagatgatgggtctgggckctctgtttggagagggagacctgcagcagctggatggagac
ccagccaaggagaaacaggtggtggacagacaggtcactgctctctgggagatactctcg
aagcacgaagacgacagaagttctcctctagcctctgtggtgctgctgtacctccgtcac
tcgggcattaagctgagggactccagggtgtttccaggactcagcactgagaaggagaag
tggctcgcctttttccccaagaccaagaagctgaacagtgcaaagaaagataaggatgga
gaggacaggaagagaaaccccatcctgaagtatatcggcaagcccaggagcacctcccag
tccacgttccatgtccccttgtcgcccactgaagtgcgtcctggcagtgtgaggaacatc
atccagcagtttgagaaccacccagagatccccggggaggagggggacgagggagacctc
catagactgtcctccagcagcctgggagaggacagtatggacagccctatggtgtcggtg
cgtctggctcgtagcgagtctctgaaggcgcaaggggaggggcgtcggcggggcggggct
tcaggagtggagacagtccctcgttcccgtagcgacgtggacatggaggactgtggggag
gagatagaggggccgggcctgacacccctacaccacagcgcctcctcctcagccaccagt
agctcagcacgatccttggagaaccccacgcctccatgcacccctcggtcgtctagacga
cagtttgaggagtccccggtggccctgctccctgatgccccagccctagaggatgacgtg
gtggacagtcataactggcaggagacagtggcccctcaggtcctggctactctctgtccc
cgagaggtggaccgacaggccatcatctacgagttgttgacgacagaggcgtctcacctg
cgtactctcagggtcttggatcaggtgtttttccagaagatgaggtgtgttctgagctct
gacgagctggcctgcatcttccccaacctgcctcaggtctaccaactacatgtgagcctg
tgtgaagccatgaagaagaaaagggaatctcccatcgttcagggcatcggtgacatcatg
ctggccaggtttgagggcgtggcgggggaggagtttcaggagcaggcgtcccacctgtgc
agccagcagtctcaggctctggaactcattaagaacaagcagcgcaaagaccctcgcttc
acacacatcatccaggagtgtgaggccagtcctcactgtaggaggctgcagctgaaggac
ctgctggtgtctgagacacagagactcaccaagtaccctctgttactggacaacatcatc
aaacacacagagggtacataggatccagacctcccgcctctccaacgtgcacaggcctgc
tgccgcgggattctgcaggccgtcaatgagntcgtcagggagactgaacaccgcaacngg
ctcaaccaataccagcgcaggcttgaccccacgccacagttcaagagtctggacctgacc
agtaagacaatgatccatgagggtcctctcacctggaaagtcaataaagacaaaacttta
gagatccaggccctgctgctatcagacctgctggttctgctccagagaggtccagatgac
cggctgctgctgcgctgcccgtcccgctggctggggggaggaggtagcggggacaccaag
gcctccttcagccccgtggtccagctagactccctcctggtgcgctctgtggccacagac
aacaaggccctgtacatcatcagcaccacagagagaaagatctatgaactggtagcgggg
acgtcctcagagaaaaacacctggaaggaccaacttgaaaagaccatctcattggttgct
ggctcctcaccttcgaccaataacagatccacacctgttttctccccaaatcttggcaac
gcttcccctgtctcaactggcagccatgtctatcaatcagacgactcgatgacggagcag
gtggttctcatggagacggactcccctaacgatgaagacaacgagctcgcacgcaccaca
ccaacggatcaatcaggagctttcctctgcggggaggggcgggactacgtcaagcgacga
attggagtagcagaggcagctctggaagatgtggagacgctaaggcagctgattttccgc
gacctggaagaagatgggtggagtcacggctcagatggcacgcccacaaacgaggcagcc
aatgagaggagcccgtttaatgaccaacagaggccgacgtcctctgagactctccttagc
gtcagttccagccaatgggaggctgagcacgcagaagccccgccctcggaggtggagtcc
cccagtgtgcatgttgtgaggaaagctgtggttgcgggctccccttctatccctgttgac
atcactgaagatgtcaccctccactctgaccaatcacctgagccgagaggcgaggccagt
gtacggggaaacgtgttctacctggtgatgcctacagagcagggagagggactgctggac
gagagtcacacagatgaggtcaacgaccccccgaccaccactgaacttcctgatctggaa
caggaagtgatttcatcgcccgtacagactcatgagaaagaagggcaggtcgcttccatc
atgtctgcgggcaatcaatcggagaggggaaatctgagtctgcaggaagggcagagtcaa
tcacgaaagagcctccagagccatataatcaaaaacgtggattacattttccacaccatc
gaggagttgatgagaaagctacaccagctgagggacatagagacagctcatcaccagctc
ctgaaaacactgagagagccgcctgtcaatccagagtctggtgacctcttttgtatccag
gcaaccgtcgtcaggacaccgtttctggaccgggacccgggggacggaaaggaggcgagc
ccagcagagccagccaagctgaagatcctctccactggattctaa
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