Salvelinus sp. IW2-2015 (Arctic char): 112074083
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Entry
112074083 CDS
T05762
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112074083 (ercc1)
03460 Fanconi anemia pathway
112074083 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
112074083 (ercc1)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
112074083 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
Motif
Other DBs
NCBI-GeneID:
112074083
NCBI-ProteinID:
XP_023997074
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MEKKRFNINLDDSAFTKERTPVKPLFQPSSKAGQSAAASSSSTTSETTAQPAPPSAGQPL
SYAEFIVQSKGHAPPRVPSAPQRVGVSRVAAGTGTGIDTETGSLKQGLSQGAQGGPDVLS
SSSSVGCERPQDQAQGTKDLGSGGPPGVTEGEGQRAGTEQKQGEGQGSEGSNILGHPKPV
GSGNSIIVSPRQRGNPILKFVRSVPWEFGEVVPDYVLGQTTCALFLRSLCVYNTCFMEFL
PCVCDVAFSVPLKAVKHAHLSPGYLDPLASCWIPHHGPGLPLSLPWSTLNPGREVYPLTL
PRSDPLTPGPEVPLTPGPEVPSHPCPEVTSHPGPEADPLTPADVPSHPWPGRYLTPTLYP
CPEVALSPLPGGALSPRPELLPGPWLLTPGPEGAALSHPWPERFKLELIFLNSPEEAGRY
LETYKSYEKKPADLLKEHVEKDYLSKVTDCLTTVKSVNKTDSITLLSTFSSLEGIINAAK
EDLVLCPGLGPQKVSRKECV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaggtttaatatcaacctggacgactctgccttcacaaaagaaagaacc
ccggtgaaacccctgttccagccctcctctaaggcaggccagagtgcagcagcatcatca
tcatcaaccacctctgagaccacagctcagcctgcacccccgtctgctggccaaccacta
tcctacgcagagttcattgtccagagcaaaggccatgcacctccgagagtcccctcagct
ccacagagagtgggggtgtccagggtggctgcagggactgggaccgggatagatacagag
actggtagtttgaagcagggtctcagtcaaggagcacaaggtgggcctgatgtgctgtcg
tcgtcgtcctctgtggggtgtgagaggcctcaggaccaggcccaggggacaaaggatctg
ggttctggtggaccaccaggggttacagagggagaggggcagagggctgggactgagcag
aagcagggggagggtcaagggtcagagggcagcaacatcctaggtcatcctaaaccagtg
gggtctggtaatagtatcatagtcagccccagacagagaggaaaccccattctgaagttt
gtgaggagtgtgccttgggagtttggagaagtggtccctgactatgtccttggacagaca
acctgcgctctcttcctcaggtctctgtgtgtgtacaatacatgctttatggagttttta
ccgtgtgtgtgtgatgtggccttttctgttccactgaaagctgttaaacatgctcacctc
tcacctggttatctggaccccttggcctcgtgctggataccgcatcatgggcctggcctg
ccactctcactgccctggagtaccctcaaccctggccgggaggtgtaccctctcaccctg
cctcggagtgaccctctcacccctggcccggaggtgcctctcacccctggcccggaggtg
ccctctcacccctgcccggaggtgacctctcaccctggcccggaggctgaccctctcacc
cctgccgacgtaccctctcacccctggcccggacggtacctcacccctaccctctacccc
tgcccggaggtggccctctcacccctgcccggaggtgccctctcaccccggccggagtta
ctccctggcccgtggcttctcacccctggcccggagggtgcggctctctctcacccctgg
cccgagagatttaagttggaacttatttttcttaacagtccagaggaggcggggcgttac
ctagagacgtacaagtcctatgagaagaaaccagctgatctgctgaaggaacatgtggag
aaagactacctgtcgaaggtgacggactgtctgaccactgtgaagtctgtcaacaagact
gactccatcactctgctgtcaaccttctcttccttagaggggatcatcaatgcagctaag
gaggacctggttctctgtcctggactgggaccacagaaggtgagcaggaaggaatgtgtt
tga
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