Salvelinus sp. IW2-2015 (Arctic char): 112074452
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Entry
112074452 CDS
T05762
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112074452
03041 Spliceosome [BR:
salp03041
]
112074452
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112074452
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112074452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112074452
NCBI-ProteinID:
XP_023997397
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MEGHKLDADLYPMGPGYVTDIDVSVGTKRGSDELFSSYIMTPANGNDSKKFKGEMRSPSA
PSRVIHLRQLPGDIQDSEVISMGMPFGKVTNLLMMKGKNQAFLEMNTVDQAQTMVNYYAT
VTPLIRQQPVFMQYSNHKELKTDNSPNQVRVQAALQAVNAVQGGTMLGSTMTSMGGGMGA
TMSVGGGEMGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQ
ALVQYADPMTAQHTKMSLDGQNIYNGCCTLRVSFSKLTSLNVKFNNDKSRDYTRPDLSTG
EQHNPQPGMDQHAMAAAAFGSPGLISASPYGHGFPQAFTLQQAAGLSMPGALASFGMGPG
GMAASRLGLQALGGGGGQAGVLLVSNLNPESVTPNCLFILFGVYGDVMRVKILFNKKDNA
LVQMADGTQAQLAMSHLNGVRLQGRSLRVSMSKHTTVQLPREGHEDQGLTKDYATSPLHR
FKKPGSKNYNNIYPPSGTLHLSNIPPAVGEEDLKALFSSSGASVTAFKFFQKDRKMALIQ
MSSVEEAVESLIEFHNHDLGDNHHLRVSFSKSTI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacacaagttagatgctgatctgtatcctatgggacctggctacgtcacagac
atagatgtctcagtgggtaccaagaggggatccgatgaactcttctcctcctacatcatg
accccagcaaacggtaatgacagtaagaagttcaaaggtgagatgcggagccccagcgct
ccatcgcgtgtcatccacctgcgccagctgcctggggacatccaggattctgaggtcatc
agcatgggaatgccctttgggaaggtcaccaaccttctgatgatgaagggaaagaaccag
gcgttcctggagatgaacactgtggaccaggctcagaccatggtgaactactacgctacg
gtaacccccctcatcagacagcagcctgtattcatgcagtacagcaaccacaaggaactc
aagaccgacaactcacctaaccaagtgagagtccaggcagcactgcaggcggtgaatgct
gtccagggtggcaccatgttgggctctaccatgaccagtatggggggtgggatgggtgct
accatgtcagttggagggggagagatgggagccagaggcatggccacccagagccctgtc
cttagagtcatagtagaaaacctcttctaccccgtcacactggaagtcctgcaccagatc
ttctccaagtatgggtctgttctgaagatcatcactttcactaagaacaaccagttccag
gctctggtccaatacgctgaccccatgacggcacagcacaccaaaatgtctctagacggr
cagaacatctataacggctgctgtactctgagggtgagtttctccaagctgaccagcctc
aacgtgaagtttaacaacgataagagccgtgactacaccagacctgacctttctactggy
gagcaacacaaccctcagcctggaatggaccagcacgcgatggctgctgccgccttcggg
tctccaggtctgatctcagcgtctccttatggacacggattcccccaggccttcactcta
cagcaggctgcaggtttgtctatgcccggtgccttggcgtcattcggtatgggtccaggg
ggcatggccgctagtcgtctcggcctgcaagccctcggcggtggaggaggacaagctggr
gtcctattggtcagcaacctcaacccagagagcgttacaccaaactgcctctttattctc
tttggtgtgtatggcgacgtgatgagagtgaagattctgttcaataagaaggacaatgct
ctggtccagatggctgatggcacacaggctcagctagcgatgagccacctgaacggggtg
cgtctccagggccggtctctacgtgtctccatgtcaaaacacaccaccgtacagctgccc
agagaaggccatgaggaccaggggttgactaaggactatgccacttctcctctccaccgt
tttaagaagcctggctccaaaaactacaacaacatctaccctccctctggcacactgcac
ctctccaacatacctcctgcagtaggagaggaggatctgaaggcactgttcagcagttca
ggagcttcagtcacggccttcaagttcttccagaaggaccgtaagatggctctgatccag
atgagctcagtggaggaagctgttgagagtctcatcgagttccacaaccatgacctggga
gataaccaccacctcagagtgtctttctccaaatctaccatctaa
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